ET157

CSHL Arabidopsis genetrap mutant lines

Original: ET157

Phenotypes

Morphological phenotypes

Original description

  • small plants
Anatomical entity
/structure development stage		 Phenotypes
whole plant (PO:0000003)
  • decreased height (PATO:0000569)

Original: ET157

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24301644 [Map]; Strand: c
      • AT5G60430.2 - [+] show detail - drug transmembrane transporters;antiporters
        Distance: 0; Region: exon1 (5UTR)
      • AT5G60430.1 - [+] show detail - drug transmembrane transporters;antiporters
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: ET157 - 3-prime edge 
    GACCGTTACC GACCGTTTGC ATCCCTACCT ACAGAGACTC CAATTGGAAT 
    CGAAAAACAA ACTCGGTTCT TTTGATTTGG AGAAGTTTAT GTTCCCGATT 
    CCTCCGCCGA TCACAATCAC GGCGAGTCCT CATCCTTCTG ATTCCGGTGG 
    TGATGGTTCG AACTCGAAGT CTTCTTCCGA CGACGAGTTT GTTAGCTTGG 
    ACTCTTCCAC TTCTGGCTTC TGTTCTTCTC TCTC

AT5G60430.1

Model type
Protein coding
Short Description
drug transmembrane transporters;antiporters
Computational Description
drug transmembrane transporters;antiporters; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: proteinaceous RNase P 3 (TAIR:AT4G21900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G60430.2

Model type
Protein coding
Short Description
drug transmembrane transporters;antiporters
Computational Description
drug transmembrane transporters;antiporters; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: proteinaceous RNase P 3 (TAIR:AT4G21900.1); Has 105 Blast hits to 104 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 100; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Link
InterPro Scan - TAIR