ET24

CSHL Arabidopsis genetrap mutant lines

Original: ET24

Phenotypes

Morphological phenotypes

Original description

  • small plants
Anatomical entity
/structure development stage		 Phenotypes
whole plant (PO:0000003)
  • decreased height (PATO:0000569)

Original: ET24

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 15995395 [Map]; Strand: c
      • AT4G33160.1 - [+] show detail - F-box family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET24 - 3-prime edge 
    NNNGNNNNAG AANGAACCCA ANNNNGNNNA CNGACCGTTT NCATCCCTAT 
    CCAGAAGTGT ATTCGTAGAT ACTTTGTGTA TGATTTAGTT GCAGAAGAGT 
    GGAACGAGTT GCCGAAATGC TTCAAGGATG GAGAAGCTGT GGATTTTGTT 
    TCCGCTCTTT CTTTCCAGCC TAGGATCNAG GCTACAGTTT GAAATTTTTT 
    AGCTTTTATT GTATGGATTG TGTGTATTCT TTCTATTCAG GAAAATGCAA 
    TGTAACTTGA TTTGTAATCT GTTGACATTG GTTANAACAG GAATGCTCTG 
    TTTTATGCAA AAAAATATCA ATGCTCTGTT GAAATTTAGC TTTACTTTCC 
    ANATTCAAAC TACCANTAAT CACCACATGA GCAAATACCA TCCTTGAACC 
    GGTGAAACCG GTTTGCATCT CTAAGTACAA TCTCTCTATT ATACACCTTT 
    GCTATATATT TCATCGCGTT GTGACAATCT CCACAGACGC GTAAATTCTT 
    AATCACNCGG ATTGGTGTGG ATGGAGGANT GCTCAAAANT CCGAAAGCAA 
    CTGCTAGCTT CTCACTGTGG TAGTACAGGG CACGCTCTTT CTCTTCTTCT 
    TCCACATCTA CAAGTGTGAA ATCTGTCTCA GGAACATACC CTTCTTGTTN 
    GGATGTCTCT TATCAGTG

AT4G33160.1

Model type
Protein coding
Short Description
F-box family protein
Computational Description
F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G27340.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR