ET240

CSHL Arabidopsis genetrap mutant lines

Phenotypes

Morphological phenotypes

Original description

pale green plants

Anatomical entity /structure development stage	Phenotypes
whole plant (PO:0000003)	desaturated green (PATO:0001272)

Original: ET240

Determination of insertion point(s)

3 prime edge [+] show sequence
1. Chromosome: 2; Position: 9041102 [Map]; Strand: w
  - AT2G21070.3 - [+] show detail - methyltransferases
    Distance: 0; Region: exon1 (CDS)
  - AT2G21070.1 - [+] show detail - methyltransferases
    Distance: 0; Region: exon1 (CDS)
  - AT2G21070.2 - [+] show detail - methyltransferases
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: ET240 - 3-prime edge
```
TGGTCATGTA GAGGGGAGGA CACGAGTGAG CTCTCGGGTT GCGTGGGTAN 
TCGGTCCAGT CGATGCGAGC TCGACTACCG GAGATGAAAA CANAGGGCTT 
GAAAGATNGG TACAGAGACG CGANCGAGGC AAAATCCGGT GGGTTATCGG 
AGTATTTGCT TCGGGGTTGC TTTGTGGATC CAGGTTCTGA GCNAGCTCTC 
TTCTTCTCAC TC
```

5 prime edge [+] show sequence

Chromosome: 2; Position: 9041270 [Map]; Strand: w
- AT2G21070.3 - [+] show detail - methyltransferases
  Distance: 0; Region: exon2 (CDS)
- AT2G21070.1 - [+] show detail - methyltransferases
  Distance: 0; Region: exon2 (CDS)
- AT2G21070.2 - [+] show detail - methyltransferases
  Distance: 0; Region: exon2 (CDS)

TCTCTCTCTC NNCGNGANCT TAGTTATTAC CAAAGTCTTA TATATATAGG 
TGGATTCCTG ATGGACAGCT TTGCCCAACT GTTCCTAATA NATCGAATTA 
CATTCATTGG ATCAATGATC TTTTGTCCTC TGGGATCATT CAAAGTTTGG 
GTGGTGATGG AAGTAAAGTA AAGGGCTTTG ACATTGGTAC TGGGGCTAAT 
TGCATTTATC CNCNCCCTGG GTGCATCTCT TTTGGGTTGG AGTTTGGTTG 
GCTCAGGTTT TCCTNCTCCT TTTATTATAC TTCANCTGCA TTATACTACC 
TNCTTTAGCA GTTGGTGCTA TGTTCTCAAT TTGGTGACAA TGTTGTTTTG 
TATACAAATT TTACTGTNGT ACC

AT2G21070.1

Model type: Protein coding
Short Description: methyltransferases
Curator Summary: This gene is predicted to an encode a nuclear-localized protein that is involved in regulating the period of circadian rhythms without affecting their amplitude or robustness. FIONA1 seems to act as a central oscillator-associated component, but its transcript levels are not regulated in a circadian or light-dependent manner. FIONA1 also appears to be involved in photoperiod-dependent flowering.
Computational Description: FIONA1 (FIO1); FUNCTIONS IN: methyltransferase activity; INVOLVED IN: photoperiodism, flowering, circadian rhythm, photoperiodism; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosyl-L-methionine dependent methyltransferase, Mett10D, predicted (InterPro:IPR017182), S-adenosyl-L-methionine dependent methyltransferase, predicted (InterPro:IPR010286); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G21070.2

Model type: Protein coding
Short Description: methyltransferases
Curator Summary: This gene is predicted to an encode a protein that is involved in regulating the period of circadian rhythms without affecting their amplitude or robustness. FIONA1 seems to act as a central oscillator-associated component, but its transcript levels are not regulated in a circadian or light-dependent manner. FIONA1 also appears to be involved in photoperiod-dependent flowering.
Computational Description: FIONA1 (FIO1); FUNCTIONS IN: methyltransferase activity; INVOLVED IN: photoperiodism, flowering, circadian rhythm, photoperiodism; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosyl-L-methionine dependent methyltransferase, Mett10D, predicted (InterPro:IPR017182), S-adenosyl-L-methionine dependent methyltransferase, predicted (InterPro:IPR010286); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G21070.3

Model type: Protein coding
Short Description: methyltransferases
Computational Description: FIONA1 (FIO1); FUNCTIONS IN: methyltransferase activity; INVOLVED IN: photoperiodism, flowering, circadian rhythm, photoperiodism; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosyl-L-methionine dependent methyltransferase, Mett10D, predicted (InterPro:IPR017182), S-adenosyl-L-methionine dependent methyltransferase, predicted (InterPro:IPR010286).
Link: InterPro Scan - TAIR