ET43

CSHL Arabidopsis genetrap mutant lines

Original: ET43

Phenotypes

Morphological phenotypes

Original description

  • poor growth
Anatomical entity
/structure development stage
Phenotypes
sporophyte vegetative stage (PO:0007134)
  • decreased speed (PATO:0000304)

Original: ET43

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 25749744 [Map]; Strand: w
      • AT1G68570.1 - [+] show detail - Major facilitator superfamily protein
        Distance: 0; Region: intron5 (CDS)
    Flanking Genome Sequence: ET43 - 3-prime edge
    CGACCGTTTT CATCCCTACC TGACATTAAA GAAATGATTA AATAGTTAGT 
    TATTCGGTTA GAGAAGTCGT TAGTTAACAA AAGTTAGTTA GACTCTTTAA
    CTAACTCTCT GTTTATATAA CAGAGTATGT ATAATGTTTT CATTACCTGA
    TCGTAAAAAA ACTCAAAATG TCCGATGGAC ATGAAAGCTT CAGCGACTCC
    ATGGAGACCA TATTGAGGAA TCAACCAAAG AAACGAGATT GGAACAATCG
    TGTGAGGTTT ATCGAGGAGA CCGTGCTCAA TCGCGACGCT CTTTCGCTTT
    ACTTCGACGA ATCCGGCAAC TAACGTGGCG ATTATCGAGA TTACGAATCC
    GATTCCCATA CGGTGGAGGA ACGTGATGCC TCTTTCGAGA CCGGTGAATT
    TGCGAGCGAC TTTGACGAAG ACGCGGTCGT AGAAGATGAT TGTGGTAAGC
    ATAGCGACGG TTGTGAAGAC GGACATTGAA CCGGCTGGGA TTTGGAAGGA
    GTTTGTTAGG TGACGGTTCA TGGTTTTGGC TTGT
  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 25749869 [Map]; Strand: w
      • AT1G68570.1 - [+] show detail - Major facilitator superfamily protein
        Distance: 0; Region: exon6 (CDS)
    Flanking Genome Sequence: ET43 - 5-prime edge
    CACGGCAACG GCGCTTTTTT GGATGGCGAT TTCGATCGGA AACTATGTGA 
    GCACTTTGCT GGTGACTTTG GTTCATAAAT TCAGTGCTAA ACCGGATGGG
    AGCAATTGGT TACCGGATAA CAATTTGAAC CGAGGGAGGC TTGAGTATTT
    TTACTGGTTG ATTACTGTGT TACAAGCTGT TAATCTTGTG TATTATCTAT
    GGTGCGCCAA GATTTATACG TATAAACCGG TTCAGGTTCA TCATAGCAAG
    GAAGATAGTA GTCCGGTTAA GGAGGAATTG CAGTTGTCAA ATAGGAGTTT
    AGTTGATGAA TGAGTCTTGG CGTTGGATGT GTAATGTAAA ATTACTAAAT
    TAGTATAGTT GTAATATGTA CTTATCAATC CAATAAATTA GAAAGAATGA
    CTTTGTCCAT TGTTGTGGGT GTTCAATATT GATAAACCCA CCTCACAATT
    TTTTTATTTT TTTGATAAAC CTATATAATC CGATCGGAAT TAAATTAAAA
    CAACATTCGT AAATTCCAAA CCAAATTTAC TTTGGGTTAA TACTAATA

AT1G68570.1

Model type
Protein coding
Short Description
Major facilitator superfamily protein
Computational Description
Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: peptide transporter 1 (TAIR:AT3G54140.1); Has 5938 Blast hits to 5565 proteins in 1029 species: Archae - 0; Bacteria - 2262; Metazoa - 736; Fungi - 385; Plants - 2206; Viruses - 0; Other Eukaryotes - 349 (source: NCBI BLink).
Link
InterPro Scan - TAIR