ET44

CSHL Arabidopsis genetrap mutant lines

Original: ET44

Phenotypes

Morphological phenotypes

Original description

  • poor growth
Anatomical entity
/structure development stage
Phenotypes
sporophyte vegetative stage (PO:0007134)
  • decreased speed (PATO:0000304)

Original: ET44

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 8353314 [Map]; Strand: c
      • AT4G14550.1 - [+] show detail - indole-3-acetic acid inducible 14
        Distance: -3295; Region: intergenic
      • AT4G14560.1 - [+] show detail - indole-3-acetic acid inducible
        Distance: -7744; Region: intergenic
    Flanking Genome Sequence: ET44 - 3-prime edge
    TTTACCGACC GTTACCGACC GTTTTCATCC CTAGACGAGG ACAGGTCCAA 
    ACAAAGTAGT GACTGATTGG TAGAAGGAGA TTTATGAGAT GGTCCGGGTT
    ATAATGTTAA GCCATTTTCA AGAAGTTATA CGTGTTGGTT CTTATGATAT
    GTAAATCTAT TGTGGTCTCT CCTGTGACCA CAACAGATTG CATTTGACCA
    CGTGATTTTC TATTTAGCAA TCAATTCACG ATTGGTATAC ACAACCCTTA
    TATATATTCC AAACAAAATA ATTAATTCTT ACATCTATCA AAACTATATT
    TAAAACGAAA GTCAGACTAA TTTCAACATT ATAACCATCA TGGTTAATCT
    AAACGAAAGT TAAGAGTAAT TTCAACATTA CAACCATCAT ATGGTTCATA
    CTTTTTTTTT TT

AT4G14550.1

Model type
Protein coding
Short Description
indole-3-acetic acid inducible 14
Curator Summary
IAA14 is a member of the Aux/IAA protein family. Involved in lateral root development. Gain of function mutation decreases auxin-inducible gene expression. Protein is localized to the nucleus. Expressed in stele and root tip epidermis. Functions as a negative regulator of ARF7/19.
Computational Description
indole-3-acetic acid inducible 14 (IAA14); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid 7 (TAIR:AT3G23050.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G14560.1

Model type
Protein coding
Short Description
indole-3-acetic acid inducible
Curator Summary
auxin (indole-3-acetic acid) induced gene (IAA1) encoding a short-lived nuclear-localized transcriptional regulator protein.
Computational Description
indole-3-acetic acid inducible (IAA1); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid inducible 2 (TAIR:AT3G23030.1); Has 1898 Blast hits to 1895 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1895; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR