ET49

CSHL Arabidopsis genetrap mutant lines

Original: ET49

Phenotypes

Morphological phenotypes

Original description

  • small plants
Anatomical entity
/structure development stage		 Phenotypes
whole plant (PO:0000003)
  • decreased height (PATO:0000569)

Original: ET49

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17563237 [Map]; Strand: c
      • AT4G37330.1 - [+] show detail - cytochrome P450, family 81, subfamily D, polypeptide 4
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: ET49 - 3-prime edge 
    ANTAAAGGGN GACGACCGTT TTCATCCCTA CTTACAAGAA TGNTTCCTTT 
    GANTGNTGNC ATCCGTATAG TAATCAGGGN TGAATGNCTT GGAGNGCAAG 
    CAAGAGATCG ATCATAGTTT CACCTTTTTC CTTCTCCGCA CGNTTTTCGT 
    CGACTAATTT CTGCAAAAAC GTATCAAACC TATTTCCCAA ATTCTTGATT 
    CGTTTTTCAT CTCNCTCGAA NGAAANGTGN AATGGAAAGA TAATCAATGG 
    GGTTTC

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8519334 [Map]; Strand: c
      • AT1G24070.1 - [+] show detail - cellulose synthase-like A10
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: ET49 - 3-prime edge 
    AGTGGAGANG ACGACNGNNT CCATNCCTAC TCCTATCANT CNNCTGATNN 
    GGGTTTCCGC TCANTCACCT TGNCGTAATA TTACTGGAAA GTTCATGTAT 
    GATACCCTCT ATGAACACTA AGAGGGAGAT TATCNANCTA AAACCCNCCN 
    NACNCTTGAA TAAGGGANCT ATAAATAAGC TCCTAAATTC TCGTGTCCAT 
    GTAGTGTCGA TGCTTATCCT CGCACCATTT ATGGATGCTT CAAGCTTCTT 
    GAGAGCTTCA GCTGCATCCT CAGAACTCCC TCGATGGAAC TTCTCATGCA 
    TAAATAAATA GACAAAATTA GAAATTATCC GTAAAGCAGA GAAACAGAGC 
    GAGTGATAGA GAAAGAAAGA TATGCTGGTG TTAATTACCA TTAGAGAGAG 
    GAAGGCAAGA CATGAATCTT GTAAGAAGAT GAGTGACTTC AGAAACGTAG 
    TCATTTTCTT TTTGTCTAGT TTAAGCTCAT CAGTGACTAA CTTCAAGAGA 
    GACTCTGATT GAATGGTGCA TTTGCATCTT TAAGCTANCA CATTGATTTT 
    ATTTTNATTT TTTTTTGGTT TTTTTAANTT AAAACCTTTG NTGGGTTTCC 
    TTNATTTGGG TGGGTCCCCA ACTTNTCNTT AAAATTNTAT TNTNCTTNNC 
    TAATNNTTGG GAAAAAATNC TGATAACCCC CAACCATTTT TTCNCACCTT 
    TAACCCNCCC CCCCNAGGGA AAAAAANAAA CCCCNNNNAA AANNTTTTTC 
    CTTTTNCCAA NCCNTGGTCA AAAAAAAANA AAN

AT1G24070.1

Model type
Protein coding
Short Description
cellulose synthase-like A10
Curator Summary
encodes a gene similar to cellulose synthase
Computational Description
cellulose synthase-like A10 (CSLA10); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT4G13410.1); Has 5025 Blast hits to 5019 proteins in 1468 species: Archae - 208; Bacteria - 3931; Metazoa - 29; Fungi - 85; Plants - 483; Viruses - 11; Other Eukaryotes - 278 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G37330.1

Model type
Protein coding
Short Description
cytochrome P450, family 81, subfamily D, polypeptide 4
Curator Summary
member of CYP81D
Computational Description
"cytochrome P450, family 81, subfamily D, polypeptide 4" (CYP81D4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 81, subfamily D, polypeptide 5 (TAIR:AT4G37320.1); Has 36638 Blast hits to 36468 proteins in 1879 species: Archae - 61; Bacteria - 6348; Metazoa - 11702; Fungi - 7393; Plants - 9479; Viruses - 6; Other Eukaryotes - 1649 (source: NCBI BLink).
Link
InterPro Scan - TAIR