ET5073

CSHL Arabidopsis genetrap mutant lines

Original: ET5073

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: ET5073

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 18433610 [Map]; Strand: c
      • AT4G39730.1 - [+] show detail - Lipase/lipooxygenase, PLAT/LH2 family protein
        Distance: 0; Region: exon2 (3UTR)
    Flanking Genome Sequence: ET5073 - 3-prime edge 
    AAAAAGCTTT CTTGGGTCGT TTAAGTGATG TGTTGTGATT CGTGAGACTT 
    GTCTGTATTG TTTGTATTCT CGTTGTTCTT GTGAGTGTAA TCTGGCGTCC 
    ACGAACTATG ATACAATGTC ATCTCGACGT CTTAATTCCC C

AT4G39730.1

Model type
Protein coding
Short Description
Lipase/lipooxygenase, PLAT/LH2 family protein
Computational Description
Lipase/lipooxygenase, PLAT/LH2 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, plasma membrane, chloroplast, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipoxygenase, LH2 (InterPro:IPR001024), Lipase/lipooxygenase, PLAT/LH2 (InterPro:IPR008976); BEST Arabidopsis thaliana protein match is: Lipase/lipooxygenase, PLAT/LH2 family protein (TAIR:AT2G22170.1); Has 247 Blast hits to 225 proteins in 46 species: Archae - 0; Bacteria - 3; Metazoa - 94; Fungi - 0; Plants - 147; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Link
InterPro Scan - TAIR