ET5251

CSHL Arabidopsis genetrap mutant lines

Original: ET5251

Phenotypes

Morphological phenotypes

Original description

  • apetala-like
Anatomical entity
/structure development stage
Phenotypes
flower (PO:0009046)
  • abnormal (PATO:0000460)

Original: ET5251

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 19658307 [Map]; Strand: c
      • AT1G52780.1 - [+] show detail - Protein of unknown function (DUF2921)
        Distance: -336; Region: promoter
    Flanking Genome Sequence: ET5251 - 3-prime edge
    TANCGACCGT TTTCATCNGN CCNAACCAAT TAATCAGGAT TTTTCGTATT 
    TTTGNNCATG ACCTAATTGN TGATATAAAT TTAGAAATAT AATGTTAATG
    ATTAATTTTN TTCCANTCTT ATTAACTATA TAGTTAGACA NCGGAAAACA
    TCNGAAATGA TTAGTTGAGG GTCNATGAAA AATANCAAAN ATGTATATAT
    ATATATAGT
  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 19658207 [Map]; Strand: c
      • AT1G52780.1 - [+] show detail - Protein of unknown function (DUF2921)
        Distance: -436; Region: promoter
    Flanking Genome Sequence: ET5251 - 5-prime edge
    AAATATTAAT AGTGGGNCGG CNCATAACAA AGTTTTGAAT AAATAAAATG 
    ATTTATCTAA ATATAAATGA TTGTTATCAC AATTTTTAGT GGTTGGTTCA
    ATAAATTTAT GCGTGAGTGG TTGACTTGAC TTTAAAGATG GAAGAGGCGT
    GTTCGACGGG ATATGTTTTA AGTGAGATCC CATTAGTCAT TGACCTCGAC
    TTACTTTAGT TTTCTTCTCA NGTCTTTGTT CTTCTCTCCC AACCATAAGA
    TACGTCAATT TCATTCGTAC ATATATAGAA GATAATTTAG AAGTAGCCTT
    TTTCAACGAC AAATATTTTG GGCTTGATAT TGTTTGGGCC GAAATATTTG
    GCCCAAAGAG CCGCTATAGC TAATGCAGGT TTATAGATAG CAGCTGAGGC
    TGAAAGTGAA AGACAAAAAG CATTAGGAAA TTGAAGAGGA ACAAACCNAG
    ACAGTGAGAA ACCAAAGAAA ATGTCTTAAA ACCTATTGTA GACTTGTTGT
    GTTTCNAANA TAAAAAACTA NCTGATGATA AAACAGAGAA ACNAGATGTT
    CAAGAATCTA AGATTCTAAG AGAGTCTTGG GATAAGATAA AAAC

AT1G52780.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF2921)
Computational Description
Protein of unknown function (DUF2921); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: cultured cell, callus, leaf; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2921 (InterPro:IPR021319); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF2921) (TAIR:AT4G21700.1); Has 114 Blast hits to 99 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR