ET5251

CSHL Arabidopsis genetrap mutant lines

Original: ET5251

Phenotypes

Morphological phenotypes

Original description

  • apetala-like
Anatomical entity
/structure development stage		 Phenotypes
flower (PO:0009046)
  • abnormal (PATO:0000460)

Original: ET5251

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 19658307 [Map]; Strand: c
      • AT1G52780.1 - [+] show detail - Protein of unknown function (DUF2921)
        Distance: -336; Region: promoter
    Flanking Genome Sequence: ET5251 - 3-prime edge 
    TANCGACCGT TTTCATCNGN CCNAACCAAT TAATCAGGAT TTTTCGTATT 
    TTTGNNCATG ACCTAATTGN TGATATAAAT TTAGAAATAT AATGTTAATG 
    ATTAATTTTN TTCCANTCTT ATTAACTATA TAGTTAGACA NCGGAAAACA 
    TCNGAAATGA TTAGTTGAGG GTCNATGAAA AATANCAAAN ATGTATATAT 
    ATATATAGT

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 19658207 [Map]; Strand: c
      • AT1G52780.1 - [+] show detail - Protein of unknown function (DUF2921)
        Distance: -436; Region: promoter
    Flanking Genome Sequence: ET5251 - 5-prime edge 
    AAATATTAAT AGTGGGNCGG CNCATAACAA AGTTTTGAAT AAATAAAATG 
    ATTTATCTAA ATATAAATGA TTGTTATCAC AATTTTTAGT GGTTGGTTCA 
    ATAAATTTAT GCGTGAGTGG TTGACTTGAC TTTAAAGATG GAAGAGGCGT 
    GTTCGACGGG ATATGTTTTA AGTGAGATCC CATTAGTCAT TGACCTCGAC 
    TTACTTTAGT TTTCTTCTCA NGTCTTTGTT CTTCTCTCCC AACCATAAGA 
    TACGTCAATT TCATTCGTAC ATATATAGAA GATAATTTAG AAGTAGCCTT 
    TTTCAACGAC AAATATTTTG GGCTTGATAT TGTTTGGGCC GAAATATTTG 
    GCCCAAAGAG CCGCTATAGC TAATGCAGGT TTATAGATAG CAGCTGAGGC 
    TGAAAGTGAA AGACAAAAAG CATTAGGAAA TTGAAGAGGA ACAAACCNAG 
    ACAGTGAGAA ACCAAAGAAA ATGTCTTAAA ACCTATTGTA GACTTGTTGT 
    GTTTCNAANA TAAAAAACTA NCTGATGATA AAACAGAGAA ACNAGATGTT 
    CAAGAATCTA AGATTCTAAG AGAGTCTTGG GATAAGATAA AAAC

AT1G52780.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF2921)
Computational Description
Protein of unknown function (DUF2921); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: cultured cell, callus, leaf; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2921 (InterPro:IPR021319); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF2921) (TAIR:AT4G21700.1); Has 114 Blast hits to 99 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR