ET5534

CSHL Arabidopsis genetrap mutant lines

Original: ET5534

Phenotypes

Morphological phenotypes

Original description

  • apetala-like
Anatomical entity
/structure development stage
Phenotypes
flower (PO:0009046)
  • abnormal (PATO:0000460)

Original: ET5534

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 7952401 [Map]; Strand: c
      • AT4G13680.1 - [+] show detail - Protein of unknown function (DUF295)
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET5534 - 3-prime edge
    TTTACGACCG TTACCGACCG TTTGGCAATG AGGCAGAGTC ACAAGAGGAG 
    GCAGCGAAAT GCGTTTCCGA TCCGTTTCAT GGTTTAGATT CACTTCTCGG
    AGACGCAACA CGCCGTCCTT CAAAGTAGGT AGCCATCCAC CGCATGATCC
    TATCGCTCCC ATTTCCTTGA GCAGCTCTGC ACAAATCTTA TCTTCGTTCT
    CACTCATCTC TTCCCACCCT TCGAAAGAAA GGGTTCGAAG AAAATGACTA
    GACCTCATAG TCATGGCTAT TCCCCGATTA CCTCCACATG GATCAGCGCA
    GAGCAAGACA CGAGTCTGAG AATCAGTTTG CAACGACAAA GATGAGAGGC
    CATTAGAAAG ATGAGGAGAG GATCTCACCA GCACAGGTTT CCGAAAGCAG
    AGCTTCGAGT GCTGATTGAG AAGCAAAGAC ATGAATAATG TTCTTAACGG
    AAAGCCGATT GAAGAGA
  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 7952311 [Map]; Strand: c
      • AT4G13680.1 - [+] show detail - Protein of unknown function (DUF295)
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET5534 - 5-prime edge
    TCCTTGGCCC ATCCCACAAT ATGTCACCAA CGTGGCCATG TCTACGTCTT 
    CCCCTGAAGA ANNGGACTGT GTTGTGGCTG TCAAGTTCCT GGGACCTCAA
    CTCAGCTTTT GCAGACCCGC TCAAAGCAAT TCCGAGTGGA TCAACATCAG
    AATGACAGAC CCCTGCTTCT TCTCNCTCGA C

AT4G13680.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF295)
Computational Description
Protein of unknown function (DUF295); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF295 (InterPro:IPR005174); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF295) (TAIR:AT5G55270.1); Has 197 Blast hits to 193 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 197; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR