ET5644

CSHL Arabidopsis genetrap mutant lines

Original: ET5644

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile
Anatomical entity
/structure development stage
Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: ET5644

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 6593653 [Map]; Strand: w
      • AT3G19070.1 - [+] show detail - Homeodomain-like superfamily protein
        Distance: -120; Region: promoter
    Flanking Genome Sequence: ET5644 - 3-prime edge
    CATCCCTAAA ATTACCCTTT CTAGAGAGAG CAAAAATACC CATACTGTTG 
    AGAATTACTA AAAACCCACA TGTTATGATG TTAACGCAGA TATCAATATA
    AATGTTTGCT CTAGCAATCC AAGGAAGTGA GCTTTATGAA AATCGAATTC
    AGGCGTACAG AGAACTGATT ACTTTCTTGG AAATACATGT TTCCAATGAT
    TATTCATCAT GCTGCATGCG TGTGATTTTT CTTATTTTCT CCATTACTTT
    GCTAACTCTA AAATGGGCTC AAGTTACTTT GCTCTCAACT TTTAAAGCTA
    TCAACTCCAG TGTAAAATAA ATTAATAAAT ATTATACAAC TTAAGGGTAT
    GGAACATACC AAGCAATTAG GACGTACATT AATTGGTATA TTTCTCCTGA
    TTTCATATTT GTAGCCTAAC TAATAAAACT GCAATTATTT TATATTAAAA
    ACAGCGTACA CGGTACATCA ATGCAGTTTC TAGCTTCGTG CATG

AT3G19070.1

Model type
Protein coding
Short Description
Homeodomain-like superfamily protein
Computational Description
Homeodomain-like superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT5G06800.2); Has 18617 Blast hits to 9609 proteins in 654 species: Archae - 8; Bacteria - 972; Metazoa - 4790; Fungi - 3902; Plants - 2478; Viruses - 331; Other Eukaryotes - 6136 (source: NCBI BLink).
Link
InterPro Scan - TAIR