ET5667

CSHL Arabidopsis genetrap mutant lines

Phenotypes

Morphological phenotypes

Original description

semi-sterile

Anatomical entity /structure development stage	Phenotypes
seed (PO:0009010)	present in fewer numbers in organism (PATO:0001997)

Original: ET5667

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 1; Position: 20444575 [Map]; Strand: c
- AT1G54790.1 - [+] show detail - GDSL-like Lipase/Acylhydrolase superfamily protein
  Distance: -546; Region: promoter
- AT1G54790.2 - [+] show detail - GDSL-like Lipase/Acylhydrolase superfamily protein
  Distance: -546; Region: promoter

GGTATATATG TTGATCACCG CTACGTGTTT GATCCTCAAT TGTGACAATC 
ATCAAGTTCA TATCAAGGTA TGCATATTTC AAATTACTTT ATTCGATCAA 
GCAAATAAAA TCTTCAACAT CTTCTTCATC TCGTGCGACC AGGGGACATT 
TGCAACATTC CATTTAATAA ATTAACCATA ATCTCAATAG TTGCAATGGT 
TAAAAAGTAA CCGCTTATAA CACTTAAATC TCCAACATGT TTTGCTTGCA 
GTTTGGGGCA CTAATTGTTA TAAAAGTTAG CTCTCTCAGT ACCCCCAAAC 
TGGTAAGGGA GTTTCTGATA CAAGGGTTGT TTTATAAAAA TCCAATGTGA 
TTGATCGTTG GGGATGATTT AACAA

5 prime edge [+] show sequence

Not mapped

GTTCAGGAAT TACTTGCAAT TTTTGGACTG ATAATTGGAC ATCTTTAGGT 
CCTCTTGTGG ATGTAACAGG AGATCTCGGG CCTAGAGTTT CTGGTCTTCC 
TCGGAATTCT GTTGTTGCGG ATGCTTTAAT AGGAGGGGCA ATGGTGGCTG 
ACCAATTCTC GAAGTAGGAG TCCAATTATT CAGCTTCTCA AAAATTGCCT 
TCCTTCTCCA GCTATTGTCA GTTTGCAGGA AGATGCAAAA AATGATGTTT 
ATCTTTGGAA AATTGGCAAT AACCAAGCCT CTAATGTGTG CTCTACTGCT 
AAAACTTGGG ATCATCTTCA TCC

AT1G54790.1

Model type: Protein coding
Short Description: GDSL-like Lipase/Acylhydrolase superfamily protein
Computational Description: GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT3G05180.1); Has 3125 Blast hits to 3084 proteins in 113 species: Archae - 0; Bacteria - 78; Metazoa - 0; Fungi - 4; Plants - 3041; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G54790.2

Model type: Protein coding
Short Description: GDSL-like Lipase/Acylhydrolase superfamily protein
Computational Description: GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT3G05180.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR