ET5683

CSHL Arabidopsis genetrap mutant lines

Phenotypes

Morphological phenotypes

Original description

semi-sterile

Anatomical entity /structure development stage	Phenotypes
seed (PO:0009010)	present in fewer numbers in organism (PATO:0001997)

Original: ET5683

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 2; Position: 10001167 [Map]; Strand: c
- AT2G23470.1 - [+] show detail - Protein of unknown function, DUF647
  Distance: 0; Region: exon1 (CDS)
- AT2G23480.1 - [+] show detail - transposable element gene
  Distance: -726; Region: promoter

ACCTCGTAGT ACCCAGTAAC GTAGCTCGTC GTCTTCCAAT CATAATCAAA 
AAGTCTGGCA AAGTTTCTAG GTACTTCATC AAAGGAGATT CCTTGGAGTT 
GCTATGTGTT GATGAAGAAG AAGATGATTC GACGTCGTTT TGCCTTGGGC 
TCGATGATGG TTTCTGGAAA TTGATAAGAC TTACTTCTTC AGCTGCAAAA 
GACTTCTTTT TACCGAAACA AGTCAGTGAC AATTATATAA GTTATGTCAA 
ATGGAAGTTT TTGCACAGAG TTTTCAGCTC TGCTTTACAG GTTC

AT2G23470.1

Model type: Protein coding
Short Description: Protein of unknown function, DUF647
Computational Description: ROOT UV-B SENSITIVE 4 (RUS4); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF647 (InterPro:IPR006968); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF647 (TAIR:AT5G49820.1); Has 409 Blast hits to 406 proteins in 122 species: Archae - 0; Bacteria - 0; Metazoa - 106; Fungi - 58; Plants - 179; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G23480.1

Model type: Transposable element gene
Short Description: transposable element gene
Computational Description: similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G35794.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G29710.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G04330.1); similar to hypothetical protein Tb927.4.5120 [Trypanosoma brucei TREU927] (GB:XP_826463.1); contains InterPro domain Protein of unknown function DUF287; (InterPro:IPR005048)
Link: InterPro Scan - TAIR