ET580

CSHL Arabidopsis genetrap mutant lines

Original: ET580

Phenotypes

Morphological phenotypes

Original description

  • small plant
Anatomical entity
/structure development stage		 Phenotypes
whole plant (PO:0000003)
  • decreased height (PATO:0000569)

Original: ET580

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 7947383 [Map]; Strand: c
      • AT3G22420.1 - [+] show detail - with no lysine (K) kinase 2
        Distance: 0; Region: exon4 (CDS)
      • AT3G22420.2 - [+] show detail - with no lysine (K) kinase 2
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: ET580 - 3-prime edge 
    GACCGTTTTC ATCCCTACAG GTAAAAAAGT AGAACACTAA AGAAATGAAG 
    CAATTGGTGT ATGCTTATTC TAACACGGCT ACTTTATTTA CATAGTCGTT 
    CTCCACCAAT TATACATAGA GATCTCAAAT GTGATAACAT TTTCATCAAT 
    GGAAACCAAG GTGAAGTCAA GATCGGTGAC CTTGGACTCG CTGCGATTCT 
    TCGTAAATCA CATGCCGTTC GTTGCGTTGG TACTTCAAAA CCTTCACATC 
    ATTGGAACTT TATTGCTTTA ATTATGTTTT TTACAACTTT GGACCTACCT 
    TTACTATGTT TATGTGTTGT TAAAGGAACC CCTGAGTTTA TGGCTCCAGA 
    AGTGTATGAT GAGGAATATA ATGAGTTGGT TGATGTATAT GCTTTTGGCA 
    TGTGTGTGTT GGAAATGGTT ACTTTTGATT ATCCTTACAG TGAATGTACT 
    CACCCGGCAC AAATCTACAA GAAAGTTACC TCGGTAAATT ATCTTGGACT 
    TGCTTGTTCT TGAAGCTAAT TTGAGGTCAA GTCTTGTT

AT3G22420.1

Model type
Protein coding
Short Description
with no lysine (K) kinase 2
Curator Summary
Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. Its transcription is under the control of circadian rhythms.
Computational Description
with no lysine (K) kinase 2 (WNK2); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: with no lysine (K) kinase 1 (TAIR:AT3G04910.1); Has 103279 Blast hits to 102406 proteins in 3863 species: Archae - 91; Bacteria - 9763; Metazoa - 38283; Fungi - 9889; Plants - 28050; Viruses - 396; Other Eukaryotes - 16807 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G22420.2

Model type
Protein coding
Short Description
with no lysine (K) kinase 2
Curator Summary
Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. Its transcription is under the control of circadian rhythms.
Computational Description
with no lysine (K) kinase 2 (WNK2); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: with no lysine (K) kinase 1 (TAIR:AT3G04910.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR