ET5863

CSHL Arabidopsis genetrap mutant lines

Original: ET5863

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile
Anatomical entity
/structure development stage
Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: ET5863

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 18608224 [Map]; Strand: c
      • AT2G45135.2 - [+] show detail - RING/U-box superfamily protein
        Distance: -600; Region: promoter
      • AT2G45135.1 - [+] show detail - RING/U-box superfamily protein
        Distance: -967; Region: promoter
    Flanking Genome Sequence: ET5863 - 3-prime edge
    GNCNCTNNNN CATNTTTNNA NANTTGGCCA CATTGGAGCA GGTATTTTAC 
    CGACCGTTAC CGACCGTTTT CATCCCTAGA GCTGACATCA GAGCGTCTTC
    AGGAATATGA CTTCATCTCT CTCNACNACA CTTGTTTCAA TAAAGAGGTG
    CGTGCGTGCG TGTTATAAGT AACATTGACN AAAATTTTCA CGATTTTGCT
    TGCTTGCTTA CTCTTTTACT CGTTATTGGT GTTAGATTGG GATCTTGTAT
    AAGCTTAAGT ATGGGGAAAT AGGTGCTAAG TTGATATCCA AATCATCCCG
    TCCTATGGCT CAGTTCACTG GTACTGTTAG ACACCTCGGT AAACTCTCTG
    GTTTGGAACT CACTTCCATG AGTATTGTTG ACATTAACGG ACACAAGCTC
    GATAAGTGGC ATGTTGGGCT CACTCTCATT GCAGGGAACG CCTCTGTGCA
    GATTAGACGG TTAGTAGTTT TAAAACGTTG ATTCCTCCAC CTCTTATAGA
    ACAATAAGCA TTGTGTGGTG AATTCTGAAT ATGTTTCCTC TTTGCAGAGA
    GGCTGATAGA TACGTTGTTT CAACCCGCCA TCAGATTCAC CCGAGATTTG
    TGTCGCTCAC TGAGCTGAGA TCACTGTATT TCTGGCGCAT ATCACTCCCG
    TCCACTGTGG CGATGGGATT CGAGTTCGAG CTTAACCCTA GGATAACTCT
    TGAANTGATG GTCTCCGAAT CCCATCTTCA ACCTCCGAAT GTTGCACTCC
    AATATCAATG TTTCAAGGGC TCAGTGTCTC ATTANAATTT ACGGTGATGT
    CTACTCCAAA AAAAATGGTG TATCTTTTGG GTTTTCGTCC TTCTTCCTTT
    CNNNNAATAA CC

AT2G45135.1

Model type
Protein coding
Short Description
RING/U-box superfamily protein
Computational Description
RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841); Has 5 Blast hits to 5 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G45135.2

Model type
Protein coding
Short Description
RING/U-box superfamily protein
Computational Description
RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841); Has 5 Blast hits to 5 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR