ET5870

CSHL Arabidopsis genetrap mutant lines

Original: ET5870

Phenotypes

Morphological phenotypes

Original description

  • stunted plants
Anatomical entity
/structure development stage		 Phenotypes
sporophyte vegetative stage (PO:0007134)
  • abnormal (PATO:0000460)

Original: ET5870

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 17016434 [Map]; Strand: c
      • AT3G46300.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET5870 - 3-prime edge 
    TTATAGATTN GGGCAGGTAG NTANGACCGT TACCGACCGT TTTCATCCCT 
    ACTTTGAGGC CATGGTCGCT TTTTTGGAGG GTACTTCTAA CTTCTAGTGT 
    GAACTGTTTT CCTTATTTTT TCGTGATGAA GTTGGGTTTA GCTTAAATAT 
    ATATTCATAG AAAATCCTTA TCCATATCAT TTCTTACTTT TATTTTGTGA 
    TACAAAAATA CCAAGTCAGA GAAAAAAGTT GAGAAGTTTT CTCAACTTTT 
    AGCTATGAAA GTTTTCTCAG TAATGTTTCT AAGTTTTTCA TAAGAAAAGA 
    AAATAGGATT AATCACAAAG GAGAATTTCT CCAATATCCC TATAATATTT 
    CCTCATATCC CTCATGCATT CTCAAATCTT CTCTATTCCT ACTTATATAT 
    ATCTCGCTCT CATTTTCTGA TTTTCTGATT CATCTCTCTC GAAG

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 17016387 [Map]; Strand: c
      • AT3G46300.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET5870 - 5-prime edge 
    TTCCGGCCNT TTGCCCCTTC TCAAAGTGNG CCCATGACCG TGTAAACATC 
    AAAAGAGACT CCATTTGCGT CCGGCCGGTT ATGACTTACG CCAATCTTTA 
    CAAGTGGCCG ATGGCGGAGG CCGAGTTCGT ACGGTCAATC AACCATGACG 
    GTAGCCAGCG TTGCACCACG GTGGTTGACA NCATATCTTG TACGCAAATG 
    TACCTTAGAA GCTACACCTT TTCAACAGAA NAGAACGAAG AAGATGGTGA 
    TGGAGGTGAT GGCGAAGCAG TTAACCANAG ACACNATCAG AGTTGTTTTC 
    GAGGAGGAGG AGGGAGAAAG AAGGCGGCCA ANAACGCTAT GCGGAATAAC 
    AAAACATGGT CGTGTAGGAC GTTTGTTTTC AGACTAGTAC GGAAATGTTT 
    GTCTTGTGCG TCCACTACTA AGGTTACTAA TATTGATTGA TCACTATGAG 
    GATAATAAAA CANTTTTCTG AAATTGTTTT AAAGTTCAAG ACTTGGTCGT 
    GGTGAAAGAG ANAAACAAAC CAATGGAACC GGACAAATAC TGTTCCAAGA 
    CAAAAAAAGA NAACTGAAAT NGATTAANAT CNAACAGTTT CTTAAACCNC 
    ACAAGAACCA TNAAGAACTC TGTTTTAACT TCTAAACTNA CNATACNATT 
    GAAACNACAA GAGT

AT3G46300.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46310.1); Has 37 Blast hits to 37 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR