ET5897

CSHL Arabidopsis genetrap mutant lines

Original: ET5897

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: ET5897

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 4781877 [Map]; Strand: w
      • AT3G14330.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
        Distance: 0; Region: intron1 (CDS)
      • AT3G14340.1 - [+] show detail - unknown protein; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bac...
        Distance: -880; Region: promoter
    Flanking Genome Sequence: ET5897 - 5-prime edge 
    AAAATTCGAA ACTCGTGTCT TCGAAAAGTG CAGTATCTGT GACTGTGATT 
    GTGGAGATGA GAC

AT3G14330.1

Model type
Protein coding
Short Description
Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description
Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G46790.1); Has 35559 Blast hits to 14091 proteins in 265 species: Archae - 0; Bacteria - 6; Metazoa - 58; Fungi - 108; Plants - 34937; Viruses - 0; Other Eukaryotes - 450 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G14340.1

Model type
Protein coding
Computational Description
unknown protein; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR