ET5911

CSHL Arabidopsis genetrap mutant lines

Original: ET5911

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: ET5911

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 313157 [Map]; Strand: w
      • AT1G01910.4 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
        Distance: 0; Region: exon8 (3UTR)
    Flanking Genome Sequence: ET5911 - 3-prime edge 
    TATGATCTCT TGTAACAGCT TTTTATATAC TGTAGACTGG TCTTGCAACA 
    GAGAAGGAAA ATTCATGTAA AAAAATTATA GTAAATAAGA GATGTTTTGA 
    TTTATTGACA AATTCTTACA AGTTTAGGGT AAGCTTTTGT TCAATAAGTT 
    TCTTTGGTAT ATAATAAATA TGAAAATGGC AATCAATAGA TGCGAAATTT 
    ATTCCCACGT CACGGCGATT GGGCTTCTGA CGTTGTATTT GTCACATAT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 313157 [Map]; Strand: w
      • AT1G01910.4 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
        Distance: 0; Region: exon8 (3UTR)
    Flanking Genome Sequence: ET5911 - 3-prime edge 
    TATGATCTCT TGTAACAGCT TTTTATATAC TGTAGACTGG TCTTGCAACA 
    GAGAAGGAAA ATTCATGTAA AAAAATTATA TTAAATAAGA GATGTTTTGA 
    TTTATTGACA AATTCTTACA AGTTTAGGGT AGGCTTTTGT TCAATAAGTT 
    TCTTTGGTAT ATAATAAATA TGAAAATGGC AATCAATAGA TGCGAAATTT 
    ATTCCCACGT CACGGCGATT GGGCTTCTGA CGTTGTATTT GTCACATATC 
    CAAACCAGAA CTCCAAAGGA AGACGAAGAC GAATTTCTCG AAGCTTCTGC 
    ATCATACGTC ACCGTATAAC TCAACCTCTC TCTGGCCTTC TGGAACGTGA 
    GCACCTTTGG TTCATCTCTC TC

AT1G01910.4

Model type
Protein coding
Short Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATP binding; INVOLVED IN: cellular metal ion homeostasis, anion transport; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, anion-transporting (InterPro:IPR003348); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G10350.1); Has 2854 Blast hits to 2413 proteins in 784 species: Archae - 172; Bacteria - 1905; Metazoa - 150; Fungi - 222; Plants - 105; Viruses - 0; Other Eukaryotes - 300 (source: NCBI BLink).
Link
InterPro Scan - TAIR