ET5956

CSHL Arabidopsis genetrap mutant lines

Phenotypes

Morphological phenotypes

Original description

possible ethylene mutants

Anatomical entity /structure development stage	Phenotypes
whole plant flowering stage (PO:0007016)	late (PATO:0000693)

Original: ET5956

Determination of insertion point(s)

3 prime edge [+] show sequence

Not mapped

TGACTGGCGA TGCTGTCGGA ATGGACGATA TCCCGCAAGA GGCCCGGCAG 
TACCGGCATA ACCAAGCCTA TGCCTACAGC ATCCAGGGTG ACGGTGCCGA 
GGATGACGAT GAGCGCATTG TTAGATTTCA TACACGGTGC CTGACTGCGT 
TAGCAATTTA ACTGTGATAA ACTACCGCAT TAAAGCTTTT GCCATTCTCA 
CCGGATTCAG TCGTCACTCA TGGTGATTTC TCACTTGATA ACCTTATTTT 
TGACGAGGGG AAATTAATAG GTTGTATTGA TGTCGGACGA

3 prime edge [+] show sequence

Not mapped

CGAAGCGAGC AGGACTGGGC GGCGGCCAAA GCGGTCGGAC AGTGCTCCGA 
GAACGGGTGC GCATAGAAAT TGCATCAACG CATATAGCGC TAGCAGCACG 
CCATAGTGAC TGGCGATGCT GTCGGAATGG ACGATATCCC GCAAGAGGCC 
CGGCAGTACC GGCATAACCA AGCCTATGCC TACAGCATCC AGGGTGACGG 
TGCCGAGGAT GACGATGAGC GCATTGTTAG ATTTCATACA CGGTGCCTGA 
CTGCGTTAGC AATTTAACTG TGATAAACTA CCGCATTAAA GCTTTTGCCA 
TTCTCACCGG ATTCAGTCGT CACTCATGGT GATTTCTCAC TTGATAACCT 
TATTTTTGAC GAGGGGAAAT TAATAGGTTG TATTGATGTT GGAC

5 prime edge [+] show sequence

Chromosome: 5; Position: 23279624 [Map]; Strand: w
- AT5G57480.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
  Distance: 0; Region: exon1 (CDS)

GGNNGTNCCN TNNCCNTATC TCNATCCTTT GGNCCTTTGC NCATTTCCAA 
AGTCGGGCCC CGGGGCCANT TTATAATTCC TATTCTTAAT CAAAGCCTCA 
CTTACATGNA GCAGGAGTCN TCTCAGCCTT CTCCACAACC ATCTCCATCT 
CCTTCAAAAC GTCGCCGTTT ATATCTTCCA CCCCATACCC CAAATAATTC 
TTCAACAAAA TCTTCAACGA TGGGAAGTTA CAAAAACTCA TGTAGATATG 
CATATCCATT CTCCCACTTC TAAGCAATGC AGGATCAAGC TTCTCTATAT 
GATTGGTCGT AAACACAAAG ATCCTCTCAC TTCCACAACA AGACCAAAGC 
CCATCTGTAA AATTCAACAA ACCCGACAAC GTTATAGTAT TCCCATTACC 
ACCTTCCTCT CCCGAACCAC CCGAACCTGA ACCCGAACCG TTTCTTCTCT 
CTCGACGAA

AT5G57480.1

Model type: Protein coding
Short Description: P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description: P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G25835.1); Has 17733 Blast hits to 16589 proteins in 2814 species: Archae - 1008; Bacteria - 6904; Metazoa - 2230; Fungi - 2111; Plants - 1942; Viruses - 24; Other Eukaryotes - 3514 (source: NCBI BLink).
Link: InterPro Scan - TAIR