ET5977

CSHL Arabidopsis genetrap mutant lines

Phenotypes

Morphological phenotypes

Original description

embryo lethal

Anatomical entity /structure development stage	Phenotypes
seed (PO:0009010)	present in fewer numbers in organism (PATO:0001997) present in fewer numbers in organism (PATO:0001997)

Original: ET5977

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 3; Position: 5062312 [Map]; Strand: w
- AT3G15030.1 - [+] show detail - TCP family transcription factor 4
  Distance: 0; Region: exon2 (CDS)
- AT3G15030.2 - [+] show detail - TCP family transcription factor 4
  Distance: 0; Region: exon2 (CDS)
- AT3G15030.3 - [+] show detail - TCP family transcription factor 4
  Distance: 0; Region: exon2 (CDS)

GATTNTTTNA CCGTTACCGA CCGTTTTCAT CCCTAGATGG AATTGGTCGT 
CAGACATTGG TAGAGCATAT TCGTCGAGAC GGCGGCGGCG GCGACGGTGG 
TCGTCGTTAG AGGGTGAGGA ATCCAGAGTA ACTCAAAAAG GATGAAACTC 
CCGCATACTT GCTCTCCTCA CCTCAAAACC CTAACCCTAA AAACAATCCT 
AAGAAGAAGA GGAAGAAGAG GTTTAGTGAA AATTGTGGAC TAACCCATAT 
TTGAGAGAAT CTCTCTCTTT TTTTCTATAG CTTAAAGTCT CTCTCTATTG 
TTTGGTCTGT GTAGTAAATA GAAAACGCAA GAAGGAGACC AAAGAGATGA 
AGCAAGCAAA GCAAGCGAAG GTGAGAGAGA GAAGAGAGAA AGGGAGATGT 
GTAATTGACC AATCAAGAAA AACCCAGAGA AAGC

AT3G15030.1

Model type: Protein coding
Short Description: TCP family transcription factor 4
Curator Summary: Arabidopsis thaliana TCP family transcription factor. Regulated by miR319. Involved in heterchronic regulation of leaf differentiation.
Computational Description: TCP family transcription factor 4 (TCP4); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 (TAIR:AT1G53230.1); Has 1577 Blast hits to 1575 proteins in 330 species: Archae - 0; Bacteria - 0; Metazoa - 88; Fungi - 13; Plants - 1470; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G15030.2

Model type: Protein coding
Short Description: TCP family transcription factor 4
Curator Summary: Arabidopsis thaliana TCP family transcription factor. Regulated by miR319. Involved in heterchronic regulation of leaf differentiation.
Computational Description: TCP family transcription factor 4 (TCP4); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 (TAIR:AT1G53230.1); Has 1577 Blast hits to 1575 proteins in 330 species: Archae - 0; Bacteria - 0; Metazoa - 88; Fungi - 13; Plants - 1470; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G15030.3

Model type: Protein coding
Short Description: TCP family transcription factor 4
Curator Summary: Arabidopsis thaliana TCP family transcription factor. Regulated by miR319. Involved in heterchronic regulation of leaf differentiation.
Computational Description: TCP family transcription factor 4 (TCP4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 (TAIR:AT1G53230.1).
Link: InterPro Scan - TAIR