ET5997

CSHL Arabidopsis genetrap mutant lines

Original: ET5997

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: ET5997

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2222297 [Map]; Strand: c
      • AT3G07020.1 - [+] show detail - UDP-Glycosyltransferase superfamily protein
        Distance: -612; Region: promoter
      • AT3G07020.2 - [+] show detail - UDP-Glycosyltransferase superfamily protein
        Distance: -595; Region: promoter
      • AT3G07025.1 - [+] show detail - pre-tRNA
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: ET5997 - 3-prime edge 
    GACCGTTACC GACCGTTTTC ATCCCTATTT GCCTTACACG CAAAAGGTCT 
    CCAGTTCGAT CCTGGGCAGC ACCAATTTTT ACTCTCAGAG ATATTAAAGA 
    AAAACTCATG TTGTTGATAT GTTCTTCGTA TCACCACATT TCAGAACAAT 
    TAATTTTGTG TTTGTGACTA AGAATTAATC AAATTTTCTT CTATTCTGCC 
    AACTCGTAAG ATAAAACGTC TTCCAAAATT CTAGTGCACC TATACTTATT 
    CAATTATTTT CAAAGAAAGT ATTAAAATAG AATTAAGAGT GATTGAAGAT 
    GCTATCTAAA GGGAGTGCAG CTAAGTTTGG TTGTCTCTTT TTGTTCTTTA 
    ACTCCTTCTA ATATCTGCAC TAAATCTTTT CTCCCTTAGA AAACCATTTA 
    TTTTGACACG TTATACTGAG AAATTTGGAC TAATACTAAA CACAAAAGCA 
    AACCATAACC CATAGCTAAT TACAACATGC AACAAAAGAT TATTTTTGCA 
    CTTAGCTAAA TTTGTGCAGA

AT3G07020.1

Model type
Protein coding
Short Description
UDP-Glycosyltransferase superfamily protein
Computational Description
UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: lipid glycosylation, carbohydrate metabolic process, metabolic process; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 28 (InterPro:IPR004276), UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G43620.3); Has 2447 Blast hits to 2409 proteins in 631 species: Archae - 0; Bacteria - 1513; Metazoa - 298; Fungi - 386; Plants - 150; Viruses - 3; Other Eukaryotes - 97 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G07020.2

Model type
Protein coding
Short Description
UDP-Glycosyltransferase superfamily protein
Computational Description
UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: lipid glycosylation, carbohydrate metabolic process, metabolic process; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 28 (InterPro:IPR004276), UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G43620.3); Has 2464 Blast hits to 2426 proteins in 636 species: Archae - 0; Bacteria - 1528; Metazoa - 298; Fungi - 386; Plants - 152; Viruses - 3; Other Eukaryotes - 97 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G07025.1

Model type
Pre-tRNA
Short Description
pre-tRNA
Computational Description
tRNA-Val (anticodon: TAC)
Link
InterPro Scan - TAIR