ET6027

CSHL Arabidopsis genetrap mutant lines

Phenotypes

Morphological phenotypes

Original description

semi-sterile

Anatomical entity /structure development stage	Phenotypes
seed (PO:0009010)	present in fewer numbers in organism (PATO:0001997)

Original: ET6027

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 2; Position: 17160366 [Map]; Strand: c
- AT2G41170.1 - [+] show detail - F-box family protein
  Distance: 0; Region: exon1 (CDS)

CATCCCTAGG TGCCAAATAT GATGATGATC CTCTGTTTTC ACAACCATGG 
TTTGAACTTA ACCATGCAAA GGGTTTCAAA TTCGCAACAA ACCTCGAACT 
CCAGTTTGGT TTACTCTTTC TACTACTACT ACTACTACTT GTGAGACATC 
TCATTATCGT AGCAACGTGA GATTTCCACT CTTGAATCGC TGCATCACCC 
ATCAATCTTC CCCATTTTGT CTCCATATGC TTCTCCCATA GATGATCGCT 
TACACACTTA TCTCTTAGCT CGGAGCAAAC ACTAGTCATT GCACAGAGCT 
CTGATGGTGA GAGCTTCTCT AATATGCAGT CTAAGGTTAA GTCCGGCAAA 
TCCAGGAGAG ACATTTTGTT TTCATCTC

5 prime edge [+] show sequence

Chromosome: 2; Position: 17160204 [Map]; Strand: c
- AT2G41170.1 - [+] show detail - F-box family protein
  Distance: 0; Region: intron1 (CDS)

TTTTGGTTCC CTGCTCAAGT CTACAATCGC GAGGTATTCA TGCTTATGAT 
CGAATCATGA ACAAAGATTT CGTCTTTTTT TTGTGTGTGG TTTTGGTGTT 
ACCCATTTGA CTGATTTGGA GAAAAATTGC TTCTTTTGAT TTCTAAATTT 
GCAAAACGGA CATGTTGGAT TCATGATGTC TTGTGACGAT GCTAAAATCA 
CATACGATTT CAATACTGAT ACTTTTCAAG CTAGGTATAC AAATTCTTCC 
CGGAAAATGT GATATTTTTC TGAGGATTTT TCATTAAAAT TTGAATTACT 
CTGTTTTTTT TCAAAATACT CGGCACATGG CCGGCAATCG GCGGAGGATA 
AGGTGACTTG GCAAAGGCTG AAACCGTCTC AAAACAACAC AAATTCACTT 
GATCTGCACG TGTCAAATTG TTTGCACGGA CTTCGACCTG GTGACCATTT 
CGAGATCCAA TGGCGACAAA CCAAAGAATT CCCTTATGGT GGGCATCTTC 
TTTCTCTCTC TCTTTCCCAA ATATTT

AT2G41170.1

Model type: Protein coding
Short Description: F-box family protein
Computational Description: F-box family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT2G26850.1); Has 87 Blast hits to 86 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 86; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link: InterPro Scan - TAIR