ET6064

CSHL Arabidopsis genetrap mutant lines

Original: ET6064

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile
Anatomical entity
/structure development stage
Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: ET6064

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2042088 [Map]; Strand: c
      • AT3G06550.1 - [+] show detail - O-acetyltransferase family protein
        Distance: 0; Region: exon4 (CDS)
      • AT3G06550.3 - [+] show detail - O-acetyltransferase family protein
        Distance: 0; Region: exon4 (CDS)
      • AT3G06550.2 - [+] show detail - O-acetyltransferase family protein
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: ET6064 - 5-prime edge
    TTCTTCCGAA GCAACCACTG ACCTCTGTAG TTTTTCTTTT TCTTATGCTT 
    ATATGCCGGG GTTCTACGCA GGTTTGTCCT CTTGGATGAG TCGTTCTTGG
    TTGAGAACAG GCTGACTTTA AGGGCAATGT GAGTATTGGG GTCCGTTTCT
    AGAGTAAAGT TTTGTATGTT CAAAGGTCCA TTATCCTGAA GATTCCCAAA
    TTATCTAAAT TATTTTTTTT AATGCAAAAT TGAGTTTGCA GTACTTATGG
    TATACTTTTA CATATGTGAC CGCACAGATG TCTTCAATTC ATCAAAAAAG
    GTGATGATGA TATCCTGCTT AGTTTATTCT GGAAAGATTT ATCTACCTAG
    TTACAGAGTC TTTACATTGT TCAGCAACAT CTTATATACA CTCGTTTTTT
    ATCGTTAAAG TTGGTCTAAA ATGTTAGATG GAAAAAATAG ACCCATAAGA
    TTGTGAATTT GACGTGACAA AATAAGAAAG TTTGTAAATT TGATAAGTCA
    TGATGGATAT CCTGCTTGTG TCGGTTCATT CGTATGTGCT TCTATGTGTC
    TCANTAGCTT ACATTGTTAA TCTTTTGACA CAGAGTTACA ACCGGGATCT
    CTTTCTGTTC CTTTACTTCC TTCTCATCAT CGTTTCAGCG ATAACTTCAT
    TCACAATACA TACTGATAAA T

AT3G06550.1

Model type
Protein coding
Short Description
O-acetyltransferase family protein
Computational Description
O-acetyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Cas1p-like (InterPro:IPR012419); BEST Arabidopsis thaliana protein match is: O-acetyltransferase family protein (TAIR:AT2G34410.2); Has 268 Blast hits to 266 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 107; Fungi - 39; Plants - 104; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G06550.2

Model type
Protein coding
Short Description
O-acetyltransferase family protein
Computational Description
O-acetyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Cas1p-like (InterPro:IPR012419); BEST Arabidopsis thaliana protein match is: O-acetyltransferase family protein (TAIR:AT2G34410.2); Has 268 Blast hits to 266 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 107; Fungi - 39; Plants - 104; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G06550.3

Model type
Protein coding
Short Description
O-acetyltransferase family protein
Computational Description
O-acetyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Cas1p-like (InterPro:IPR012419); BEST Arabidopsis thaliana protein match is: O-acetyltransferase family protein (TAIR:AT2G34410.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR