ET6088

CSHL Arabidopsis genetrap mutant lines

Original: ET6088

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile
Anatomical entity
/structure development stage
Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: ET6088

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7294631 [Map]; Strand: w
      • AT1G20930.1 - [+] show detail - cyclin-dependent kinase B2;2
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET6088 - 3-prime edge
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAGTTAAA CCCGCTGTTT 
    CCGCCATGGA AGCCTTTGAG AAGCTTGAGA AAGTAGGTGA AGGGACTTAT
    GGAAAAGTTT ACAGAGCAAG AGAGAAAGCT ACTGGGATGA TCGTTGCTTT
    GAAGAAGACG CGTCTCCATG AGGATGAAGA AGGTGTTCCT CCCACTACTC
    TTCGCGAGAT CTCTATCCTG CGTATGCTCG CTCGTGATCC TCACATCGTT
    AGGTTCGATT TCCTTTTACA TTTCTGATTC GGTTCACTCA ATTACTGGAA
    TTCTCCGATT TACTGGTTTT GATTGTGGAT TTAGGACTCA ATTTCGATTT
    CTAGGGTTTA GTCCCGATTA ATTGATGTCT CAATTGATTT GATGACTCTG
    ATTCTTCCTG CAAATCGCGC TTAGTCTCGC TCTTAG

AT1G20930.1

Model type
Protein coding
Short Description
cyclin-dependent kinase B2;2
Curator Summary
Cyclin-dependent kinase, expressed in flowers and suspension cell culture, expression peaks during M phase in synchronized cultures. Required for proper organization of the shoot apical meristem and for hormone signaling. Expressed in the shoot apical meristem. Involved in regulation of the G2/M transition of the mitotic cell cycle.
Computational Description
cyclin-dependent kinase B2;2 (CDKB2;2); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cyclin-dependent kinase B2;1 (TAIR:AT1G76540.1); Has 109034 Blast hits to 107606 proteins in 3051 species: Archae - 93; Bacteria - 11427; Metazoa - 41458; Fungi - 12141; Plants - 24398; Viruses - 437; Other Eukaryotes - 19080 (source: NCBI BLink).
Link
InterPro Scan - TAIR