ET6249

CSHL Arabidopsis genetrap mutant lines

Original: ET6249

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: ET6249

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 365090 [Map]; Strand: w
      • AT1G02065.1 - [+] show detail - squamosa promoter binding protein-like 8
        Distance: -119; Region: promoter
      • AT1G02065.2 - [+] show detail - squamosa promoter binding protein-like 8
        Distance: -477; Region: promoter
    Flanking Genome Sequence: ET6249 - 3-prime edge 
    TTANAGCAGA CCGTTTTCAT CCCTACTTTT TACTACTAGT ATTTTTCAAA 
    GCTTTCTAAT TTGTAATCTT AGTAGTACCT ACGTAGGATT AATTTGAATA 
    TCGAAAAAAC GTAACTCACT ACTTAGCAAC TGTTGATGGA GCCTCTAATT 
    GAACTTTTGT TTGACAAACA AATTAAACAC ACAAGTATGT ATAGACAGAC 
    TCTTACTATG TTATTTTTTA ACAGCGTATT GTATATATGG ATGATACATA 
    TATAGCCCCC GCAGGACTTT AAAAAAAAAN AAANAANANG GTCTANCTAN 
    TNTTGGTGGT GATCNTNTGG TTNAGGAAAA AGAAAAGTNN AAAACGCNTT 
    TGTTCTTCAC TTNTTTANTT ATGTCGGGAC CCGCTTCNGT CCCCCTGCGN 
    GGCCTCTCTC TNACATTNGT TTTCNTNTCN TCTAACCATA ATGCCNATTT 
    GACAATNAAA TATATCACCG TGTTCAGNTA CNNGTTCACC CTTGNTCTTT 
    TCCCGATCNA NACAAATGAA ATTCCTNTCC TTCTTGCTGC TANCAACTCC 
    NNTCNNATGG GCCNATTCAA NNATNAANNG AAACNNCNCT TGGNNATNNG 
    GNTACGAAAA AATANCANTG AAANTTTTTT TNGGGGAAAA ACTCGCNCNC 
    CTCNCATTTN NGNCAAAGTT NATNAAANAN ACNNCCTTTN AATGCCCCCT 
    TANATTCCCC TCNTCAATTT TTCCNTCNCC CTTGGTTNNA TCCCCNNANA 
    ATTCNTTGGA ATTTNCNNNT TGGNANGANT TAAGGTTTTT CTNAGGTTTC

AT1G02065.1

Model type
Protein coding
Short Description
squamosa promoter binding protein-like 8
Curator Summary
Encodes an SBP-box gene, a member of the SPL gene family. Mutants are affected in micro- and megasporogenesis, trichome formation on sepals, and stamen filament elongation.
Computational Description
squamosa promoter binding protein-like 8 (SPL8); CONTAINS InterPro DOMAIN/s: Transcription factor, SBP-box (InterPro:IPR004333); BEST Arabidopsis thaliana protein match is: squamosa promoter binding protein-like 2 (TAIR:AT5G43270.1); Has 903 Blast hits to 889 proteins in 57 species: Archae - 0; Bacteria - 2; Metazoa - 44; Fungi - 4; Plants - 841; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G02065.2

Model type
Protein coding
Short Description
squamosa promoter binding protein-like 8
Curator Summary
Encodes an SBP-box gene, a member of the SPL gene family. Mutants are affected in micro- and megasporogenesis, trichome formation on sepals, and stamen filament elongation.
Computational Description
squamosa promoter binding protein-like 8 (SPL8); CONTAINS InterPro DOMAIN/s: Transcription factor, SBP-box (InterPro:IPR004333); BEST Arabidopsis thaliana protein match is: squamosa promoter binding protein-like 2 (TAIR:AT5G43270.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR