ET6250

CSHL Arabidopsis genetrap mutant lines

Original: ET6250

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: ET6250

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 25059371 [Map]; Strand: c
      • AT1G67105.1 - [+] show detail - other RNA
        Distance: 1107; Region: intergenic
      • AT1G67110.1 - [+] show detail - cytochrome P450, family 735, subfamily A, polypeptide 2
        Distance: 2360; Region: intergenic
    Flanking Genome Sequence: ET6250 - 3-prime edge 
    CCCTAATTAT ACGTACATAC TTAATACTCT TTGTTTTTTG AGCAAAGACG 
    CACATACTTA ATACTTTGAT ACGGAGAAAA CGCTTATTAC TAAAATTTGA 
    CTCTCTATAG AACTTCAGTT GGGTGATATT CAAATTAGCT CTCATTAATT 
    AATATATATG GTGCAAAACA TATAAAAACC AACAAGAAAA TCAATAAGAT 
    GAAAATCAAT AACTTTTTTG TAGAAAATAT AAATGAGGAA TGGACATATA 
    AGAGTTAAAA GTTGGCATTA ATTATATAGA ATTACAAGTT GACATTCATC 
    TCTCTCG

  • 5 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: ET6250 - 5-prime edge 
    CTAGTTATAA GTGGTTTAAT TTTTATATCC AAAACAATAA TCTACTAGAT 
    TGTTAAATGC GAACACTAAT TTTGTTCACA AGAGTGAATT TTTATAATTA 
    TGCTTTGCGT TCGGTGATTT TATTGTTAAA TTGTTTTCTT TGGCATAATT 
    CTCACACGGT TACACCATTA TGCTTGTCTC TTATGCATAA CTCTATAAGA 
    TCTCCGAAAG AATGGAAAGT TAGAAAGATG TAATGTAACC CAAGTGTTTA 
    GAATATTGAA TAATCATATG TGAAATTGTC AATTTGGCAC ATTGAATATG 
    AGAAATTGAC AATCAAGGGT TCAATACAGT AAATGAAAAT ATTCTGGTTT 
    TCGGAACGGC ACCAATTAAA AACATTTCAA ATGGCGCCAA AAAAGTACCG 
    CCAAAAATGA ATGTTTCTGA TTGGTGGATT AAGTATCACG AGGATCGTCA 
    ACACTTTATC CAATACGCAC CG

AT1G67105.1

Model type
Other RNA
Short Description
other RNA
Link
InterPro Scan - TAIR

AT1G67110.1

Model type
Protein coding
Short Description
cytochrome P450, family 735, subfamily A, polypeptide 2
Curator Summary
member of CYP709A
Computational Description
"cytochrome P450, family 735, subfamily A, polypeptide 2" (CYP735A2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 735, subfamily A, polypeptide 1 (TAIR:AT5G38450.1); Has 33174 Blast hits to 33061 proteins in 1685 species: Archae - 70; Bacteria - 4727; Metazoa - 11578; Fungi - 6785; Plants - 8543; Viruses - 6; Other Eukaryotes - 1465 (source: NCBI BLink).
Link
InterPro Scan - TAIR