ET6252

CSHL Arabidopsis genetrap mutant lines

Phenotypes

Morphological phenotypes

Original description

semi-sterile

Anatomical entity /structure development stage	Phenotypes
seed (PO:0009010)	present in fewer numbers in organism (PATO:0001997)

Original: ET6252

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 4; Position: 54998 [Map]; Strand: c
- AT4G00140.1 - [+] show detail - Calcium-binding EF-hand family protein
  Distance: -1549; Region: intergenic
- AT4G00150.1 - [+] show detail - GRAS family transcription factor
  Distance: 2201; Region: intergenic

TTTCATCCCT ACACACCCAT CAATTTCAGA TCCCTCGCTC TCCACCTTAT 
TATATATCTT TTTAGGGGGT CGGAATTATA TTACGTACAA CCTTTTGTTG 
GTATACTCCT CTTCTTCTTC TTCTTTTGTG CAACCGTATA CTCATTTTCT 
CAAATTCAAT GTTTCTAAAT TATATATATT AAACACACAT TTGGTAGTAA 
CAAACTTGTC GCTTTGGATT TTATCATTTT AATTACAGTT CGTATAAATA 
TCTGTTGACC CTTATTAATA TGATTGAACA AACAACTAAT TTGACTAAAA 
TGCGTCATCA TAGCAAATGT ATGTTATGTT GAAATAATGA TCTCTTACAT 
TAGTTACATA CCACTTTGAA AAGGGATCGA GGATGCATGA TGCGTGATGC 
GTTCCACCAT CCGGTGCCTT TCGTTGTATC ACAATATATG AGGTTATGTT 
AGTGCCATCG TTTATAAACC AATTGTTAGA AATTTGGAAT TATATACATA 
TACATTTAAC GCACAATATC AACATTGCAA TACTCGTAAT GATTG

AT4G00140.1

Model type: Protein coding
Short Description: Calcium-binding EF-hand family protein
Computational Description: embryo sac development arrest 34 (EDA34); INVOLVED IN: polar nucleus fusion; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: calmodulin-related (TAIR:AT1G73440.1); Has 80 Blast hits to 56 proteins in 14 species: Archae - 3; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00150.1

Model type: Protein coding
Short Description: GRAS family transcription factor
Computational Description: HAIRY MERISTEM 3 (HAM3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G45160.1); Has 2283 Blast hits to 2233 proteins in 293 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2281; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR