ET6296

CSHL Arabidopsis genetrap mutant lines

Original: ET6296

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: ET6296

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24056197 [Map]; Strand: w
      • AT5G59700.1 - [+] show detail - Protein kinase superfamily protein
        Distance: -772; Region: promoter
    Flanking Genome Sequence: ET6296 - 3-prime edge 
    TATTTTACCG ACCGTTACCG ACCGTTTTCA TCAAAGACAC TATATGTATG 
    TGACCACCTC ATTTCATTTA AAATCTTTAA GCTCCTGTTT CGTTTTGATT 
    TATAAAAAAT CTCAAGGCTC AGTAGTGTAT GATACTTAAT TATAAAACTT 
    AATAGCTCAA TTATCTTGTG ACTAAAACTT GAAATGAACT TTCAACAGAA 
    CAAACATGGA ATAGTGAACT CATGATAATC TATTTATATT TGCATGAACA 
    GATGCCGAAA AAAATCATGT GTCCAGTGCT TCGTTCATAA ATATGGACGG 
    AAGTTTTGTA TCTCCTTAAA AAAAAAAAAA

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24056327 [Map]; Strand: w
      • AT5G59700.1 - [+] show detail - Protein kinase superfamily protein
        Distance: -902; Region: promoter
    Flanking Genome Sequence: ET6296 - 5-prime edge 
    ACGACATTAA CCGCCCCAAC TTTTCATCTA AATGGAACAT GACATATAAT 
    AGAGTTTATC TGAAAGGATC GATAAGATGT CGCTATATTT ACTAAAATTA 
    TCTATAATAT GATGAGCCCA CTATGTTTTT CTTGACAATT GGGAACTTAT 
    TATATAATTC TTGAATATCA CAACGTATAA ATGATCATTT ACATATATCT 
    AGTGCTTGTG TTAGTGTCGT GTGTAATATC CAAGTTCAAG CATGTGTCAT 
    ATGTTGTACA AAATAGTTTC AGCCTAAAAT GATATTTGTG GACCTGTGTT 
    GTCTACCGAC ACATTTGTTT GGACAGTGGA AACAACAATT CTATATATAT 
    TAAAGCATAA TTAAGAAGAA TAAAATAAAA ATTGGTTGAG ATGTCGCAAG 
    GAGAATGACT TTT

AT5G59700.1

Model type
Protein coding
Short Description
Protein kinase superfamily protein
Computational Description
Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Malectin/receptor-like protein kinase (InterPro:IPR021720), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: hercules receptor kinase 1 (TAIR:AT3G46290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR