ET6340

CSHL Arabidopsis genetrap mutant lines

Original: ET6340

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: ET6340

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19688968 [Map]; Strand: c
      • AT2G48150.1 - [+] show detail - glutathione peroxidase 4
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: ET6340 - 5-prime edge 
    TCTTTTCGCT CATACTAGAG GAGGAGGTTG CATCGGCGCT GTGATATTTG 
    TTTATTCCTT ATCGTTGTTG TTGCTGTTGT TTCCTGGGAA TTAGGATAGC 
    TCCGGCAAGG ACCTGAATAT GAGCATTTAC CAAGGGAAAG TCCTCCTCAT 
    CGTCAATGTT GCTTCCAAAT GGTTCATCTC ACTCGA

AT2G48150.1

Model type
Protein coding
Short Description
glutathione peroxidase 4
Curator Summary
Encodes glutathione peroxidase.
Computational Description
glutathione peroxidase 4 (GPX4); FUNCTIONS IN: glutathione peroxidase activity; INVOLVED IN: oxidation reduction, response to oxidative stress, N-terminal protein myristoylation; LOCATED IN: cytosol; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336), Glutathione peroxidase (InterPro:IPR000889); BEST Arabidopsis thaliana protein match is: glutathione peroxidase 5 (TAIR:AT3G63080.1); Has 7346 Blast hits to 7345 proteins in 1724 species: Archae - 2; Bacteria - 3554; Metazoa - 785; Fungi - 210; Plants - 383; Viruses - 8; Other Eukaryotes - 2404 (source: NCBI BLink).
Link
InterPro Scan - TAIR