ET6342

CSHL Arabidopsis genetrap mutant lines

Original: ET6342

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: ET6342

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 11528230 [Map]; Strand: w
      • AT1G32050.1 - [+] show detail - SCAMP family protein
        Distance: -215; Region: promoter
    Flanking Genome Sequence: ET6342 - 3-prime edge 
    TTACCGACCG TTACCGACCG TTTTCATCCC TATACATTAG CATGATGCTC 
    CGAATCTCAA GCTACGTATA GACTAGTGAA TACTTGAAAG ATCTGGTCCG 
    TAAGATTTGC GTCCCCTGGG CGCTTAATCT CCACCATGCA AATGACCTCT 
    ACTAAAAAGA CATACATAAC AGCAAAGAAC CAAACAAGCC GATAGAGGGG 
    CAACGATGAG AGTGAAGATG GGAGAAACAA TGGAGATGAG CATGAGAGCT 
    GCAAGAGCCC CAAAGAGATG GCTGATGTGT CCAACGAAGT GGTGGATCGG 
    AGCTTGGTTA CTATTGAGCT TCATCTCTCT CG

AT1G32050.1

Model type
Protein coding
Short Description
SCAMP family protein
Computational Description
SCAMP family protein; FUNCTIONS IN: transmembrane transporter activity; INVOLVED IN: protein transport; LOCATED IN: mitochondrion, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: SCAMP (InterPro:IPR007273); BEST Arabidopsis thaliana protein match is: secretory carrier 3 (TAIR:AT1G61250.1); Has 679 Blast hits to 677 proteins in 107 species: Archae - 0; Bacteria - 0; Metazoa - 375; Fungi - 14; Plants - 225; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink).
Link
InterPro Scan - TAIR