ET6344

CSHL Arabidopsis genetrap mutant lines

Original: ET6344

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: ET6344

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3976592 [Map]; Strand: c
      • AT3G12540.1 - [+] show detail - Protein of unknown function, DUF547
        Distance: 0; Region: exon5 (CDS)
    Flanking Genome Sequence: ET6344 - 5-prime edge 
    ATATATGAGT ACTTACAGAT TCCCTAGGTT CGCATGGACT CTGCAAGATG 
    GATCCTTCGA TATCTAGAGC AGACAGTTGT GTACCTCCCA CGTCAATTGT 
    TGCCTACAAC ACAAGTCAAT TTTGTTCATT AACTTAAGTA TGCGAAGTTT 
    AAAGATGTTT CTTGTTTTGT ATTAGTTACC ATTTTGAGAA TGGTCAGCAG 
    TTTTTCCTTT GATGAAGGTA GTCCGTGTTC CAAAAATCCC TGCAAACAAA 
    CAAAGTTATT TCCGAAATCT TGACTTTGCT TCAACTAAAT ATGAATTGAG 
    TCATGGAATT ACATTCATAA CGCAGGCGTT GTAGGTATTG ATCCAAAATG 
    CCATCTTTTT CTTGTGGTTC AAGAAACTCA AATCCACTTT GCTCAACTTC 
    TCCTTCAAAA CCCTGCATGT GTGTTTAATT ATACAGAGAT CATGAAATTC 
    TTGTGATCTC ATCAGGTAAA TA

AT3G12540.1

Model type
Protein coding
Short Description
Protein of unknown function, DUF547
Computational Description
Protein of unknown function, DUF547; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF547 (InterPro:IPR006869); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF547 (TAIR:AT2G39690.1); Has 544 Blast hits to 542 proteins in 72 species: Archae - 7; Bacteria - 26; Metazoa - 31; Fungi - 0; Plants - 446; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink).
Link
InterPro Scan - TAIR