ET6354

CSHL Arabidopsis genetrap mutant lines

Original: ET6354

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: ET6354

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 6719522 [Map]; Strand: c
      • AT1G19415.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: ET6354 - 3-prime edge 
    TACCTGCAGA TCTCGTTGGG ATTAGTGGTC TAAACGATAA TGATTGGAAA 
    TTGTTACAAC ACATGCTTGC ATAGCGCAAG AACAAGTCAA CAGAACGTCT 
    CTCCGGTAAG TTTTTCTTTG AATCATGGAT CATTGATACA AGCGCGTCGA 
    ATCATATGAC GGGTACACTT GAATTTTTGC TTGATATACA TGGCATGGCA 
    CCTGTTTTGA TAAAACTTCC GGATGGACGG TTCACAACCT CCACAAAACA 
    TGGTCGTGTA TTGATGGGTT CTTCATTAAG TCTCCAAAAT AAGTTCTTTG 
    TTGATAGGCT TCATTGTCAT CTCATTTCAG TATCACTATT GACTAGAGAC 
    AGTGGATA

AT1G19415.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
copia-like retrotransposon family, has a 6.1e-43 P-value blast match to gb|AAO73529.1| gag-pol polyprotein (Glycine max) (SIRE1) (Ty1_Copia-family)
Link
InterPro Scan - TAIR