ET6597

CSHL Arabidopsis genetrap mutant lines

Original: ET6597

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: ET6597

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 7799682 [Map]; Strand: w
      • AT2G17930.1 - [+] show detail - Phosphatidylinositol 3- and 4-kinase family protein with FAT domain
        Distance: 0; Region: intron8 (CDS)
    Flanking Genome Sequence: ET6597 - 5-prime edge 
    CTTGCAAACT GCCCCTGAAG ATCAAGTGAT CACCTCATTA ATAAATACAC 
    ATCTTTCCCA ATCTCAAACA CTAGAAGGAT AGAGACCAAA TTAATAGCAG 
    CATAACTTGG TTTTGAAACT TAACAAACAG TAAATCATCA GTAATAGAAG 
    AAAACAAAGC CAAAAAAAAT TGAACTCTTG ATCACAACAT CTGATTTTGA 
    ACAGCAACCA GCATTACCTG AGGAATATTA CGCTTGAAAG TACTGAATTT 
    CCCCACAAAG GCATCCAGGA TACGTCCCTA TTTACAGGTG CAACATGAGG 
    TAAGTTAATG GACAGAGAAG CCAATCAATT CTAAAATGAA CTCTCCAGTG 
    AATTTCTACC AGTAAAATCC GTGCTTCA

AT2G17930.1

Model type
Protein coding
Short Description
Phosphatidylinositol 3- and 4-kinase family protein with FAT domain
Computational Description
Phosphatidylinositol 3- and 4-kinase family protein with FAT domain; FUNCTIONS IN: inositol or phosphatidylinositol kinase activity, binding, phosphotransferase activity, alcohol group as acceptor; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403), PIK-related kinase, FAT (InterPro:IPR003151), PIK-related kinase (InterPro:IPR014009), Armadillo-type fold (InterPro:IPR016024), PIK-related kinase, FATC (InterPro:IPR003152), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: phosphotransferases, alcohol group as acceptor;binding;inositol or phosphatidylinositol kinases (TAIR:AT4G36080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR