ET6600

CSHL Arabidopsis genetrap mutant lines

Phenotypes

Morphological phenotypes

Original description

semi-sterile

Anatomical entity /structure development stage	Phenotypes
seed (PO:0009010)	present in fewer numbers in organism (PATO:0001997)

Original: ET6600

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 1; Position: 11577218 [Map]; Strand: w
- AT1G32170.1 - [+] show detail - xyloglucan endotransglucosylase/hydrolase 30
  Distance: 0; Region: intron3 (CDS)

TACTTATTGG CACATCATCT ACCCAAAATC TGGAATGATT GTGACACAAG 
TTACGTTAAT GACAAAGCTA ATTACACAAA AAATTCAAAA GATATATAGT 
AGTTCTCAAA TGTTAATGAA ATGTAACAAT TATAACAATC AAGAAATAAC 
GAGAGAGAAA AAGGAATATT AAAAAATTAT TTGAAGTTAT GATTAAAATT 
GTTTTCACTA ATTTTTTTAA TAAAGAGAGA TTTATAGTTT AATTACGCGC 
AATGTAATTA ATCTTCAGTA CTCAATAAAG TAGCCTTTAA TTGCCACTCG 
AGGCCTACGT TCATCTCTC

AT1G32170.1

Model type: Protein coding
Short Description: xyloglucan endotransglucosylase/hydrolase 30
Curator Summary: xyloglucan endotransglycosylase-related protein (XTR4)
Computational Description: xyloglucan endotransglucosylase/hydrolase 30 (XTH30); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 29 (TAIR:AT4G18990.1); Has 2058 Blast hits to 2046 proteins in 299 species: Archae - 2; Bacteria - 244; Metazoa - 0; Fungi - 398; Plants - 1344; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink).
Link: InterPro Scan - TAIR