ET6831

CSHL Arabidopsis genetrap mutant lines

Original: ET6831

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: ET6831

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 16748428 [Map]; Strand: w
      • AT4G35190.1 - [+] show detail - Putative lysine decarboxylase family protein
        Distance: 162; Region: intergenic
      • AT4G35200.1 - [+] show detail - Arabidopsis protein of unknown function (DUF241)
        Distance: 714; Region: intergenic
    Flanking Genome Sequence: ET6831 - 3-prime edge 
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAAATGGA ACAGCCTATT 
    CCTGCTCCGT AAGATTTGGG GAAAGTTGGA TCCCGCTGCA ACCACAAAAT 
    ATCATTGTGA TGGTTTGTGT TGTTCTTTCT GATCTTCATA ATTGAGGGAA 
    TGAACTCTTT GGTATACAAC ACAAGAGATT GTGTGTTCAT TTTCTACAAA 
    GAATTGGCCA AGATTCAGTG CTGATATTTT CAGGTTGTGC ATTTTGGTGG 
    AATCAGTTTG TTGAAAGTTT GATACAGGTG GTTTCTTCAA GAGGGACAAA 
    AGAAACCCCA GAAAACAACA AACTTTAATA TTTCTCATAA TTATATCCCT 
    AAACATTGAT CAATTCTTAA CCATAAGACC CTCTAAAAGT CTAAAGGGCA 
    ATCTCAGTCT GCATGCTTGT GTTAGAACAG AACACTACTT GTTGCTGTTG 
    TTGCGGCTGT TGCACTTT

AT4G35190.1

Model type
Protein coding
Short Description
Putative lysine decarboxylase family protein
Computational Description
Putative lysine decarboxylase family protein; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00730 (InterPro:IPR005269); BEST Arabidopsis thaliana protein match is: lysine decarboxylase family protein (TAIR:AT2G37210.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G35200.1

Model type
Protein coding
Short Description
Arabidopsis protein of unknown function (DUF241)
Computational Description
Arabidopsis protein of unknown function (DUF241); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF241, plant (InterPro:IPR004320); BEST Arabidopsis thaliana protein match is: Arabidopsis protein of unknown function (DUF241) (TAIR:AT4G35210.1); Has 517 Blast hits to 501 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 509; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).
Link
InterPro Scan - TAIR