ET7

CSHL Arabidopsis genetrap mutant lines

Original: ET7

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: ET7

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 2852362 [Map]; Strand: w
      • AT4G05582.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: ET7 - 5-prime edge 
    TGTTGTCACG AGTCTTACAA CAAAGGTTAT CGACAACGAA CGGAAAATCT 
    CAGTTGAGGC TTCCATACCT AGCAAGGAGG ATAACGATTT AGCTGTCACT 
    TCTTCTAACC AAGCCCAACC ACTGCCCGTT ACTCTGACTA CAACAGAAGC 
    GATGTTAGCA CAATTCCATG GATTGATCAA AACTGATCTT TTTTGAAAGA 
    AAACGTGACA TTCGGAAAAA CAATGAGTCT TCGACCATAG CATATGTCAA 
    TGCAGTCACA CAAGGCAATG GAAAGCAGCT CAATCTAGTA CATCAGAGAG 
    AACGATTAGC AAAAGCCCCA CCTTCTTCAG TCACAAAAAA GCTTCGGTGT 
    TGATCGATAC ACTAGGGGGT CGATCGACAC CAATTGATAT TGATAACTCT 
    GTTATGCCTA TGTCGAGTGA AATCGACAAT TTCACAGAGG AGGAACTTAT 
    ACACGATAGT GTCGATCGAC ACCCACCTCA GGTCGATCGA CACCTANCTC 
    GTTCAAACAA TGTTCAAACC TCAGCTGAAG CAAAGTTAGC AAATCATAAG 
    ATTCTTTTTC CTAAGTACCC CAA

AT4G05582.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
gypsy-like retrotransposon family (Athila), has a 8.2e-76 P-value blast match to gb|AAL06421.1|AF378079_1 reverse transcriptase (Athila4) (Arabidopsis thaliana) (Gypsy_Ty3-family)
Link
InterPro Scan - TAIR