ET7065

CSHL Arabidopsis genetrap mutant lines

Original: ET7065

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: ET7065

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 6457465 [Map]; Strand: w
      • AT3G18750.2 - [+] show detail - with no lysine (K) kinase 6
        Distance: 0; Region: exon1 (5UTR)
      • AT3G18750.3 - [+] show detail - with no lysine (K) kinase 6
        Distance: 0; Region: exon1 (5UTR)
      • AT3G18750.1 - [+] show detail - with no lysine (K) kinase 6
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: ET7065 - 3-prime edge 
    CCCTAGCTGC ATCTTCTTCT TCATCCATCG ATTTCTGTCA ATTAGGGGGC 
    TGATTTTTCT TCCCATTGGG GTGCTCCTTC TCCGTGTCGT GTCAATTACA 
    GAACAAAGCT TCGTTTCTCC AGGGGTAATC GAAACGTGAG AATCTTATTA 
    ATACAAATTT ACGCGATTCT GTGGCCTTAT ACCGTTTTTT TTTTGGGGGG 
    GGAAAATTTT TAAATCGGGG G

AT3G18750.1

Model type
Protein coding
Short Description
with no lysine (K) kinase 6
Curator Summary
Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. Its transcription is under the control of circadian rhythms.
Computational Description
with no lysine (K) kinase 6 (WNK6); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G49160.2); Has 109997 Blast hits to 108787 proteins in 3825 species: Archae - 81; Bacteria - 10561; Metazoa - 41131; Fungi - 10681; Plants - 29357; Viruses - 431; Other Eukaryotes - 17755 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G18750.2

Model type
Protein coding
Short Description
with no lysine (K) kinase 6
Curator Summary
Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. Its transcription is under the control of circadian rhythms.
Computational Description
with no lysine (K) kinase 6 (WNK6); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G49160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G18750.3

Model type
Protein coding
Short Description
with no lysine (K) kinase 6
Curator Summary
Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. Its transcription is under the control of circadian rhythms.
Computational Description
with no lysine (K) kinase 6 (WNK6); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G49160.2).
Link
InterPro Scan - TAIR