ET7187

CSHL Arabidopsis genetrap mutant lines

Phenotypes

Morphological phenotypes

Original description

semi-sterile

Anatomical entity /structure development stage	Phenotypes
seed (PO:0009010)	present in fewer numbers in organism (PATO:0001997)

Original: ET7187

Determination of insertion point(s)

3 prime edge [+] show sequence
1. Chromosome: 1; Position: 23005193 [Map]; Strand: w
  - AT1G62270.1 - [+] show detail - F-box and associated interaction domains-containing protein
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: ET7187 - 3-prime edge
```
ACATCTTTCT GCAGTAAAGT CAAAACTTAT TAAGAAATCG TTGAATGAAG 
TACTCATTTT CTTCTTCTTC TTCTTCCTCT ATTTCTTCTC TTTTATGTGA 
AGCGATCCAG TAAGAATTCC CCCTTAAAGA CGGGGGGGGG GGCATCTACA 
TATGGTACTG TCAACTG
```

5 prime edge [+] show sequence

Chromosome: 1; Position: 23005434 [Map]; Strand: w
- AT1G62270.1 - [+] show detail - F-box and associated interaction domains-containing protein
  Distance: 0; Region: exon1 (CDS)

GAGATATGGA TGACAAATAA TATCACTGAG ACCAAAACCA CAACTATGTC 
TTGGAGCCCT TTTCTTAAGA TTGATTTGTA CACTTACGGG CATCGGTTTG 
GGAATGAAGT AAGTTTTTTA GTTGACGAGG AGAATAAAGT GATTGGGTGT 
TGTGATGAGG AGGAAGATGA CATCAACGAT ACTGTATACA TTATTGGAGA 
GAATGAATAT TGGAGAAAAG AGGATATTGT ACAAAGATCA TATCGGCCAC 
GTATGTTCAG TTATGTTCCT ACATATGGTA CTGTCAACTG GACT

5 prime edge [+] show sequence

Chromosome: 1; Position: 23005393 [Map]; Strand: w
- AT1G62270.1 - [+] show detail - F-box and associated interaction domains-containing protein
  Distance: 0; Region: exon1 (CDS)

GGCTTTCACT GTTTTTTCAG GACGACGGTG CATTAAAGAT GGAGATATGG 
ATGACAAATA ATATCACTGA GACCAAAACC ACAACTATGT CTTGGAGCCC 
TTTTCTTAAG ATTGATTTGT ACACTTACGG TCATCGGTTT GGGAATGAAG 
TAAGTTTTTT AGTTGACGAG GAGAATAAAG TGATTGTGTG TTGTGATGAG 
GAGGAAGATG ACATCAACGA TACTGTATAC ATTATTGGAG AGAATGAATA 
TTGGAGAAAA GAGGATATTG TACAAAGATC ATATCGGCCA CGTATGTTCA 
GTTATGTTCC TAGTTTGGTT CAAATCTAGC AGATATTCCT AGTTAGAGTT 
TTGCACATT

AT1G62270.1

Model type: Protein coding
Short Description: F-box and associated interaction domains-containing protein
Computational Description: F-box and associated interaction domains-containing protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT3G17480.1); Has 1872 Blast hits to 1811 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1870; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link: InterPro Scan - TAIR