ET7398

CSHL Arabidopsis genetrap mutant lines

Original: ET7398

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile
Anatomical entity
/structure development stage
Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: ET7398

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 20694760 [Map]; Strand: w
      • AT3G55740.1 - [+] show detail - proline transporter 2
        Distance: -739; Region: promoter
      • AT3G55740.2 - [+] show detail - proline transporter 2
        Distance: -767; Region: promoter
    Flanking Genome Sequence: ET7398 - 3-prime edge
    TACCGACCGT TACCGACCGT TGTCATCCCT ATCTATGAGT GACGACATTT 
    TATTGTACAA GTGACGAAGC GAATGACTGA GTCTAATAAC GGGGACACAC
    AGCTTTCACA ATGTGATTGA GATAACAATA AAGTGTATAT TTTATAGAAA
    GTGGAGTATT GAAAAGTCTA AAATGAGATT TATAAATCAA AATCAGCCTT
    TACGCAATGT GCGTGGCGTT GACTTTGTAG AAACAAAAGG AAAATCAACA
    CTCATGCAAA AACTTTATTA CATTTTTTTC TTAACATTAT GAGGGAATTT
    TCAATTTTCT TTCAGTCATG ACTCTGAAAT TTTGTTTTCC GACGTCGACA
    GGCGACTTAA GTCATTCCCA CAACAAATAT AGATATCTCC ATCGCGTTCA
    CATGTGTATT TGACTTTTTA CTAATTATTA GATTAAGATT CTATTTGATC
    ATTTATCTAA ATAA

AT3G55740.1

Model type
Protein coding
Short Description
proline transporter 2
Curator Summary
Encodes a proline transporter with affinity for gly betaine, proline, and GABA. Protein is expressed most highly in the roots.
Computational Description
proline transporter 2 (PROT2); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: proline transporter 1 (TAIR:AT2G39890.2); Has 1444 Blast hits to 1438 proteins in 147 species: Archae - 0; Bacteria - 3; Metazoa - 114; Fungi - 146; Plants - 1153; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G55740.2

Model type
Protein coding
Short Description
proline transporter 2
Curator Summary
Encodes a proline transporter with affinity for gly betaine, proline, and GABA. Protein is expressed most highly in the roots.
Computational Description
proline transporter 2 (PROT2); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: proline transporter 1 (TAIR:AT2G39890.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR