ET7414

CSHL Arabidopsis genetrap mutant lines

Original: ET7414

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile
Anatomical entity
/structure development stage
Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: ET7414

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 761266 [Map]; Strand: w
    Flanking Genome Sequence: ET7414 - 3-prime edge
    CCGGTACCGA CCGTTTTCAT CCCTACCTTC GTCTGTGTTT CTGATTAGTT 
    TTCTTATCTC TTAAATATCC TATTGGCCCA TCCCAAAGCT ATAAGACGGA
    CGGCGCGATT AATTACTTTT CAAACACATG AATTAACGTT TTCACATATG
    TGTTCATCTC ACTCGAC
  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 761345 [Map]; Strand: w
    Flanking Genome Sequence: ET7414 - 5-prime edge
    TACTTTATCC CTGGACGAAG TATCTCACTC TCTCTCTTTC TCTCTCCATG 
    AGAACTCTAA TCTCTCACCG GCAATGTGTG ACGTCACCGT TTCTTATCTC
    CGCCGCATCT CCACCGTTTC CTGGCCGGTG CTTTAAGTTA TCCTCCTTTA
    CTCCTCCACG TCATAGGCGT TTTTCTTCCT CACTCGACCA GAAACGTTTC
    GCATGAATCC GCCGATCAGA CTTCTTCTTC TAGGCCGCGA ACTCTTTATC
    CTGGTGGTTA CAAGCGTCCC GAACTCGCCG TTCCCGGTTT ACTTCTCCGG
    CTAGACGCCG ACGAGGTTAT GAGCGGGAAT CGTGAAGAGA CTCTTGATTT
    GGTCGACCGT GCTTTAGCTA AATCGGTTCA AATCGTCGTG ATTGATGGCG
    GAGCCACCGC TGGTAAGCTC TACGAGGCGG CTTGTTTGCT GAAATCACTT
    GTCAAAGGCC GTGCTTACCT CTTGATCGCT GAACGTGTTG ATATCGCCTC
    CGCCGTTGGT GCTAGTGG
  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 761373 [Map]; Strand: w
    Flanking Genome Sequence: ET7414 - 5-prime edge
    TCTCTCTCTT TCTCTCTCCA TGAGAACTCT AATCTCTCAC CGGCAATGTG 
    TGACGTCACC GTTTCTTATC TCCGCCGCAT CTCCACCGTT TCCTGGCCGG
    TGCTTTAAGT TATCCTCCTT TACTCCTCCA CGTCATAGGC GTTTTTCTTC
    TCTCTCGACC AGAAACGTTT CGCATGAATC CGCCGATCAG ACTTCTTCTT
    CTAGGCCGCG AACTCTTTAT CCTGGTGGTT ACAAGCGTCC CGAACTCGCC
    GTTCCCGGTT TACTTCTCCG GCTAGACGCC GACGAGGTTA TGAGCGGGAA
    TCGTGAAGAG ACTCTTGATT TGGTCGACCG TGCTTTAGCT AAATCGGTTC
    AAATCGTCGT GATTGATGGC GGAGCCACCG CTGGTAAGCT CTACGAGGCG
    GCTTGTTTGC TGAAATCACT TGTCAAAGGC CGTGCTTACC TCTTGATCGC
    TGAACGTGTT GATATCGCCT

AT1G03160.1

Model type
Protein coding
Short Description
FZO-like
Curator Summary
A new plant-specific member of the dynamin superfamily; defines a new protein class within the dynamin superfamily of membrane remodeling GTPases that regulates organization of the thylakoid network in plants. Targeted to chloroplasts and associated with thylakoid and envelope membranes as punctate structures. Knockout mutants have abnormalities in chloroplast and thylakoid morphology, including disorganized grana stacks and alterations in the relative proportions of grana and stroma thylakoids. Overexpression of FZL-GFP also conferred defects in thylakoid organization.
Computational Description
FZO-like (FZL); FUNCTIONS IN: thiamin-phosphate diphosphorylase activity, GTP binding; INVOLVED IN: vegetative to reproductive phase transition of meristem, thylakoid membrane organization; LOCATED IN: chloroplast membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiamine monophosphate synthase (InterPro:IPR003733), GTP-binding protein, HSR1-related (InterPro:IPR002917); Has 4318 Blast hits to 3768 proteins in 1124 species: Archae - 53; Bacteria - 3501; Metazoa - 428; Fungi - 84; Plants - 66; Viruses - 0; Other Eukaryotes - 186 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G03160.2

Model type
Protein coding
Short Description
FZO-like
Curator Summary
A new plant-specific member of the dynamin superfamily; defines a new protein class within the dynamin superfamily of membrane remodeling GTPases that regulates organization of the thylakoid network in plants. Targeted to chloroplasts and associated with thylakoid and envelope membranes as punctate structures. Knockout mutants have abnormalities in chloroplast and thylakoid morphology, including disorganized grana stacks and alterations in the relative proportions of grana and stroma thylakoids. Overexpression of FZL-GFP also conferred defects in thylakoid organization.
Computational Description
FZO-like (FZL); FUNCTIONS IN: thiamin-phosphate diphosphorylase activity, GTP binding, GTPase activity; INVOLVED IN: vegetative to reproductive phase transition of meristem, thylakoid membrane organization; LOCATED IN: chloroplast membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiamine monophosphate synthase (InterPro:IPR003733), Protein synthesis factor, GTP-binding (InterPro:IPR000795); Has 4303 Blast hits to 3755 proteins in 1119 species: Archae - 53; Bacteria - 3491; Metazoa - 428; Fungi - 84; Plants - 61; Viruses - 0; Other Eukaryotes - 186 (source: NCBI BLink).
Link
InterPro Scan - TAIR