ET7446

CSHL Arabidopsis genetrap mutant lines

Original: ET7446

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile
Anatomical entity
/structure development stage
Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: ET7446

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 25657370 [Map]; Strand: c
      • AT5G64110.1 - [+] show detail - Peroxidase superfamily protein
        Distance: -1340; Region: intergenic
      • AT5G64120.1 - [+] show detail - Peroxidase superfamily protein
        Distance: 1936; Region: intergenic
    Flanking Genome Sequence: ET7446 - 5-prime edge
    TAAAACTAAA TTATTTTTTA AGCAGTAAAC CCTAAACTAG TCAGGATGGG 
    GACTTTAATA TTGACTGATA CATAGTATTA CACGCAGTAT TGAGTATTAA
    ACTTCATTTT TTAAAGTATA TTAGTAATAT GTTTAAAATC TCAAGAAAAA
    ATAGCAGTAA ACACATAAAT ATTTAGAATT TTATCCTCAT ATATACTATA
    CTTTTAGGGT AAGTTCTCGT TATAATGACT GTGTGTTGAA AACTTAATAT
    TAATGATTGC ATAAGTGATT TAAGAATTGA TGTTGAAGAC AGTCCTCGTG
    CCTTCGTACA AATAAAACGC GTGAAAAAAT AACGAGAAGT ACTTTAGAAA
    AAGAAGGATA ATAACGATAC GTGATTTTTA CGTAATTACC AGAGAAAATG
    GCCGACAATC CGTCTTATCC ATTTATAGTA TATTTTCCTT TTTCCAGTGG
    TTTTATGAGG AATTATATCA TAGATTTAAT TTGATTAGTT ACAAAATTGT
    AAAGATATTT AAGAAATACA AAAATTAGAA ATTCTTTCAA GCAAAGAGGT
    ATCAAATTTT GATGCTAGAT AATTTAG

AT5G64110.1

Model type
Protein coding
Short Description
Peroxidase superfamily protein
Computational Description
Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: membrane; EXPRESSED IN: shoot apex, shoot, stamen, leaf; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G64100.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G64120.1

Model type
Protein coding
Short Description
Peroxidase superfamily protein
Curator Summary
encodes a cell wall bound peroxidase that is induced by hypo-osmolarity
Computational Description
Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity; INVOLVED IN: defense response to fungus, N-terminal protein myristoylation, respiratory burst; LOCATED IN: apoplast, cell wall, membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G39580.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR