ET7450

CSHL Arabidopsis genetrap mutant lines

Original: ET7450

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile
Anatomical entity
/structure development stage
Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: ET7450

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19269241 [Map]; Strand: w
      • AT2G46900.1 - [+] show detail - CONTAINS InterPro DOMAIN/s: Basic helix-loop-helix, Nulp1-type (InterPro:IPR0...
        Distance: -317; Region: promoter
    Flanking Genome Sequence: ET7450 - 3-prime edge
    GTTTTCATCC CTAACCACGA GCACAGCTAA ATTGTCTCTC TTTAGTGATA 
    TCTTCACTTT TACTTCAAAA AGTATTGTAA TAACGAATTC ACTATCCCCT
    TATTATTAAA AGTGAAGTAC AAATTAAAAT TTTGTCTAAT TTGGCCTCAA
    TTTTGATTTC AATTTTGGAT TTTGTTATTT GCTATTCAAA ATCATTAAAG
    ATAATTTGGT CTTAACAATC TTCTAAACTT TATATGATCT GATTGAATCT
    AAACCGTTCA ATAAAATTAA TTCCCTTCAA TCTAAACCGT TCAACAAAAA
    TAAGTGAAAT AATTTTATTT TTTTATCTTC ACTTTAAAGA CATATAATTA
    TAAATAACAT AATTCATATG GTCTTTATTT TGCCAAAAAA GTGTATAACC
    TGTCAAATAG TTAAAAAAAA CACTTATAAT CATAAAAAAT ATTATACCAA
    TTTTGTGAAT CTTACAT
  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19269364 [Map]; Strand: w
      • AT2G46900.1 - [+] show detail - CONTAINS InterPro DOMAIN/s: Basic helix-loop-helix, Nulp1-type (InterPro:IPR0...
        Distance: -194; Region: promoter
    Flanking Genome Sequence: ET7450 - 5-prime edge
    TAGCTTAGCC GAAAGCATTG GATTCTATAA ATTAACCAAC TTTATATGCG 
    GTCCAAATTC GAACTTTAAT ATAAATTTAT GCGCCAATTG TGTCAAGTAA
    AACGACGTCG TTGAGGTAAA AAAGGGATTG TAAAACGCCG TCGTTCTTTC
    TCCCGCATCT CGGTT

AT2G46900.1

Model type
Protein coding
Computational Description
CONTAINS InterPro DOMAIN/s: Basic helix-loop-helix, Nulp1-type (InterPro:IPR006994); Has 2929 Blast hits to 2464 proteins in 333 species: Archae - 2; Bacteria - 151; Metazoa - 913; Fungi - 372; Plants - 141; Viruses - 47; Other Eukaryotes - 1303 (source: NCBI BLink).
Link
InterPro Scan - TAIR