ET7465

CSHL Arabidopsis genetrap mutant lines

Original: ET7465

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: ET7465

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 753567 [Map]; Strand: w
      • AT4G01735.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: -694; Region: promoter
      • AT4G01740.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET7465 - 5-prime edge 
    TGATTGCTGT GGCCGTTTTG AATCTATTGG TGATGGGTAT TACTGCAAAA 
    TCTGTGATAT TTTCGTCCAC AAGAAATGTG GCGAGTCCTC CGAATATATC 
    GAGCATCCAT CTCACCCCAA TCACACTCTT CAGCTTCTAA GTACTAGAGG 
    AAATAGCCAT GACTGCGATT TATGTGGAAG GTGCATCGCG TGTCTATGAT 
    TCTATCGTTG TGAGATCTGC GACTTCAACG TGGATCTATA CTGTGCCAAG 
    TATCCACCAC CAGAGGTTAT TAACATTTCC AAGACGCATC ACCACAAGCT 
    CAACCTTCTC AAGGAGCTGA TCCAGTTTGA TTGTGATGCT AAGTGTGGCA 
    CTAATGATTA TGGGTTTCCA TACAAATGTT ATGAATGCGA TTTATTCTTC 
    CACAAAGATT GCGTATGGCA TCCGCCAGAG GTAAATCACA CTTTAGAGGT 
    AAACCACTCT TACCACCCGT GGCACCCTCT TAAGCTTCAC ACTGGTCAAC 
    TACCGAATTA TTCTGACCGA AAATGTCGTC TATGCGCAAA

AT4G01735.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G01740.1

Model type
Protein coding
Short Description
Cysteine/Histidine-rich C1 domain family protein
Computational Description
Cysteine/Histidine-rich C1 domain family protein; CONTAINS InterPro DOMAIN/s: DC1 (InterPro:IPR004146), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT4G01930.1); Has 1534 Blast hits to 622 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 1528; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR