ET7529

CSHL Arabidopsis genetrap mutant lines

Original: ET7529

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile
Anatomical entity
/structure development stage
Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: ET7529

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 115247 [Map]; Strand: c
      • AT4G00260.1 - [+] show detail - Transcriptional factor B3 family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: ET7529 - 3-prime edge
    ACGCGTCAAA GAGAACTTGG GAAGTGAAGA TAGATGGCCA GAGACTCACC 
    GACGGTTGGA AAGAGTTTGC TGTCTCACAT GATCTTCGAA TCGGTGACAT
    TGTTGTTTTC AGACAAGAGA GTGACTTGGC TTTCCATGTA ACACTGTTGG
    GACCTAGTTG TTGTGGGATT CAATATGGTT CATCTCACTC CACCAAGAAC
    AACCTCGGTG ACGGTGAGTT GTGTTCTGTC TCTGGCTCTT CAAGAAACGT
    GGTTTGCTTT TGGAATGTGG ATCAGTGAGT AGAGATAACC AGTTTGACTA
    TATAACACTT AGATTCTATT ATTTTTCAGA GAAAAAGAAA GTGAAGGAGA
    ATCCAAATGG AGAAGCAGAG TCTTCTTCAC GAGATCCCTC TTGTTTTGTG
    GCTAATGTTG CGCCTTCGAG TCTACGTTAT GACTTGATGG TATTTGACTC
    TTAAGAACCC GAAAAGAAAC TCTCATTCTA GGGTCTGAAC TCATGTTGTA
    TTCTAATGAA TTTTTCAGAG ATTTCCAAGG GGTTTTGTGA GGGATAATGG
    TGTAGTCGGA TCTGG
  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 9630650 [Map]; Strand: w
      • AT3G26280.1 - [+] show detail - cytochrome P450, family 71, subfamily B, polypeptide 4
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: ET7529 - 5-prime edge
    CCTACTTTCT CTCTGTACGA CAATCAATAA ACCTCTCCGG GTTAAACTCT 
    TCAGGATTTT TCCAGGATTC CGGATCTCGT CCTAGAGACC ATGCATTAAC
    AAGAAGAGCT GTTTTCCGAG GAATGTCGTA GCCTTGAATC TTGATATCAG
    CCATTGTTTC TCGTGGAAGT AAAAGAGGAG CTGCTGGGTG TAGTCTTAAG
    GTTTCTTTCA CCACAAGCTT CAAGTATTGA AGCTTATCAA GATCTTCTTC
    CATGATTCTT CCTTCCTGTT TGATTCCAAT GCAAGTTCGG ATCTCGTCTT
    GAGCTTTCTT CATTACCCGT GGGTTTCTAA CGAGCTCTGC CATCGCCCAA
    ATCAAGGTGA TGGCGCTTGT GTCAATTCCA GCGTGATATA TATTCTAGCT
    CAAGAAAAAA AACATTACAT CATTAATTAA AGATATAAAA ACCATAAAGT
    AAATTAAAGA AATTTGTTTG CTTACTGAGA GGACTCCCTT TGAGATGATC
    AACG

AT3G26280.1

Model type
Protein coding
Short Description
cytochrome P450, family 71, subfamily B, polypeptide 4
Curator Summary
cytochrome P450 monooxygenase
Computational Description
"cytochrome P450, family 71, subfamily B, polypeptide 4" (CYP71B4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 25 (TAIR:AT3G26270.1); Has 33116 Blast hits to 32807 proteins in 1665 species: Archae - 46; Bacteria - 3062; Metazoa - 12210; Fungi - 6959; Plants - 9691; Viruses - 3; Other Eukaryotes - 1145 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00260.1

Model type
Protein coding
Short Description
Transcriptional factor B3 family protein
Computational Description
maternal effect embryo arrest 45 (MEE45); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, embryo development ending in seed dormancy; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: Transcriptional factor B3 family protein (TAIR:AT2G24645.1); Has 539 Blast hits to 263 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 539; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR