ET7611

CSHL Arabidopsis genetrap mutant lines

Original: ET7611

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal
Anatomical entity
/structure development stage
Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: ET7611

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 2662450 [Map]; Strand: c
      • AT4G05150.1 - [+] show detail - Octicosapeptide/Phox/Bem1p family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: ET7611 - 3-prime edge
    TATTTTACCG ACCGTTACCG CCCGTTTTCA TCCCTATACC AATGGGATAC 
    CACCAACCTC AGACTCATCA GATGGCTGGT CCGGGTCAAG TATATGGTGG
    AACGGTTAGG CCGGTTATGA TGGCAGTTGA TGGAATGAAC CGGACGGGTT
    ATTATGGAAT GAAAACACCC GGTCCGGTTC AAATGTATCA GCATCACACT
    GGTATGGTTG TTCCTGGTGT AGAAGAACAA CAACAATACA GAACCGAAAC
    GGATTCGGAT ACGGGTCGGG CTTCTTAGCT GTTTGAAGAA GAAATATGAA
    AATTATCACA TCTGGGGTTT TGTCTTTTCA TTGGAGTCGA TCTTATTCGT
    TACTGTGTGA ACTGTGTATT ATTTTTTGTT TTTTTACTTT TGTAAAATTT
    ATTTTTGTGT GTAATAATTT TGTATTTCAA AATATAATGA ACAGTAAAAT
    CCAATAATAA TAAAATTATA ATCTATCAAT ATTGAATTAC ATTTGCTAAA
    C
  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 2662471 [Map]; Strand: c
      • AT4G05150.1 - [+] show detail - Octicosapeptide/Phox/Bem1p family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: ET7611 - 3-prime edge
    CCGTTTTCAT CCCTATACCA ATGCGGATAC CACCAACCTC AGACTCATCA 
    AATGGCTGGT CCGGGTCAAG TATATGGTGG AACGGTTAGG CCGGTTATGA
    TGGCAGTTGA TGGAATGAAC CGGACGGGTT ATTATGGAAT GAAAACAC

AT4G05150.1

Model type
Protein coding
Short Description
Octicosapeptide/Phox/Bem1p family protein
Computational Description
Octicosapeptide/Phox/Bem1p family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270); BEST Arabidopsis thaliana protein match is: Octicosapeptide/Phox/Bem1p family protein (TAIR:AT2G01190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR