ET7699

CSHL Arabidopsis genetrap mutant lines

Original: ET7699

Phenotypes

Morphological phenotypes

Original description

  • dwarf mutant
Anatomical entity
/structure development stage
Phenotypes
whole plant (PO:0000003)
  • decreased height (PATO:0000569)

Original: ET7699

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 16436385 [Map]; Strand: c
      • AT2G39350.1 - [+] show detail - ABC-2 type transporter family protein
        Distance: -3828; Region: intergenic
      • AT2G39360.1 - [+] show detail - Protein kinase superfamily protein
        Distance: 1087; Region: intergenic
    Flanking Genome Sequence: ET7699 - 3-prime edge
    TTTACCGACC GTTACCGCCC GTTTTCATCC CTAGCTTGTG TGTAACCCGT 
    GTTCGGGACA AACCAAGTTG ATCCATGCTT CTGAATCATT ACACGAGTGT
    CATCTTTGCC CTCAGATACC ATAGAGAATT GTGCGACAGC TACAAAGTTT
    GTAGGATTTT GGTAGTCCAA AAATGGGATA TTCGGAGCTA AGGTGGAGGG
    CTCTTGATGA CGTCTTTCTC GGTTGCAACA TACAATCTCG TGGGGTATCT
    TTAAAAGGGA ATACTTATTG GATTGCATCA GAAGTCATCA AAGACTTTTC
    ACTACTATTA AGTTTCGATT TCACAACCGA GAGATTTGGA CGCCTGAATC
    TTCCCTTTCT ACGTCTTGGT TATGAGATTT TGGCCTTATC AGTTGTTAAA
    GAAGAACAAC TTTCAGTTTT GCAACAGAGA TTGGATACAT CAAGGGTAGA
    GATATGGGTG ACTACCAACG ATAAGATTGA TCAAACCAAA GTCTTATCAT
    AGAGCAAGTT GTTGGCAGTG GATTTAAGCA CTTATTATGA CCATAGGTTT
    ATGTGTCATG TAAGTTTCTT TATCGACCAA GAGAATAATG TCGCCGTTTG
    TTAGTACAAA GAACAAGTAT ACATTTTTGG AGAGGAATAG AGGATCAT

AT2G39350.1

Model type
Protein coding
Short Description
ABC-2 type transporter family protein
Computational Description
ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: response to nematode; LOCATED IN: plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G55090.1); Has 383683 Blast hits to 350637 proteins in 4113 species: Archae - 6942; Bacteria - 305769; Metazoa - 8575; Fungi - 6049; Plants - 5390; Viruses - 9; Other Eukaryotes - 50949 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G39360.1

Model type
Protein coding
Short Description
Protein kinase superfamily protein
Computational Description
Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Malectin/receptor-like protein kinase (InterPro:IPR021720), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: hercules receptor kinase 1 (TAIR:AT3G46290.1); Has 117164 Blast hits to 115761 proteins in 4506 species: Archae - 99; Bacteria - 13343; Metazoa - 43886; Fungi - 9766; Plants - 32814; Viruses - 370; Other Eukaryotes - 16886 (source: NCBI BLink).
Link
InterPro Scan - TAIR