ET7707

CSHL Arabidopsis genetrap mutant lines

Phenotypes

Morphological phenotypes

Original description

embryo lethal

Anatomical entity /structure development stage	Phenotypes
seed (PO:0009010)	present in fewer numbers in organism (PATO:0001997)

Original: ET7707

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 2; Position: 19571210 [Map]; Strand: w
- AT2G47790.1 - [+] show detail - Transducin/WD40 repeat-like superfamily protein
  Distance: 0; Region: exon8 (CDS)

TTTACCGACC GTTACCGACC GTTTTCATCC CTAAAGATGG GCGACTATGT 
TGCTGGAAGT CGGATGAGGA TGCTACCGAG ATTAACCGGT CTTGGACTTC 
AAGTGAGTTG GTTGTTAAGC CGCCAAGGAA CCGCAAGAAA AACAGACACT 
CTCCTTACTA GTAAACAGAT ACTACTTTTT GGGTCTTGTG TCTTTTATAA 
AAGTTGAGAC TGAAGAGGAC AGTTTCCTTT ATGTCTCTTG TTCTTGTTAT 
TATTAAAAGG CAAAGTTGTT TAAATGAAAT ATTGAAGAAA GATTACATCT 
CTTGGGATAG CAAATTGCAG AAAGGAAAGA AAAACAGAGT ACATACAGTA 
TATATACTCT ATAGAAGAAG GAATCTTTGG CTTCAGAAGA GTAAATAGTC 
AATCAGCTCG ACACTGATCT TGTTCCAAAA TATCAGAGAT CTTCTCAATA 
GGAATCATGG GCAGATACTC TGCCCCAAAG TAGTCTCTGT CGCCAACGTA 
ACGAACCGCA TCGTTGTACT TCTCTGACCA GTAAAACGCC GTGGGGATCA 
CTAAATGCGC AACTTCAGGG AACAACGGCA GTTGATTCAG TAAACGCCAC 
AGCGTCGCTG CGTAATACTC TGCCGCTGGC TCGTACTTGT CCCGGACGCT 
TCTTGCAATG

3 prime edge [+] show sequence

Chromosome: 2; Position: 19571209 [Map]; Strand: w
- AT2G47790.1 - [+] show detail - Transducin/WD40 repeat-like superfamily protein
  Distance: 0; Region: exon8 (CDS)

TTTACCGACC GTTACCGACC GTTTTCATCC CTAAAGAGGG CGACTATGTT 
GCTGGAAGTC GGATGAGGAT GCTACCGAGA TTAACCGGTC TTGGACTTCA 
AGTGAGTTGG TTGTTAAGCC GCCAAGGAAC CGCAAGAAAA ACAGACACTC 
TCCTTACTAG TAAACAGATA CTACTTTTTG GGTCTTGTGT CTTTTATAAA 
AGTTGAGACT GAAGAGGACA GTTTCCTTTA TGTCTCTTGT TCTTGTTATT 
ATTAAAAGGC AAAGTTGTTT AAATGAAATA TTGAAGAAAG ATTACATCTC 
TTGGGATAGC AAATTGCAGA AAGGAAAGAA AAACAGAGTA CATACAGTAT 
ATATACTCTA TAGAAGAAGG AATCTTTGGC TTCAGAAGAG TAAATAGTCA 
ATCAGCTCGA CACTGATCTT GTTCCAAAAT ATCAGAGATC TTCTCAATAG 
GAATCATGGG CAGATACTCT GCCCCAAAGT AGTCTCTGTC GCCAACGTAA 
CGAACCGCAT CGTTGTACTT CTCTGACCAG TAAAACGCCG TGGGGATCAC 
TAAATGCGCA ACTTCAGGGA ACAACGGCAG TTGATTCAGT AAACGCCACA 
GCGTCGCTGC GTAATACTCT GCCGCTGGCT CGTACTTGTC CCGGACGCTT 
CTTGCAATGC TCTTGGGTAG TGTCCACAAC GCCGGTGCGC T

5 prime edge [+] show sequence
1. Chromosome: 2; Position: 19571311 [Map]; Strand: w
  - AT2G47790.1 - [+] show detail - Transducin/WD40 repeat-like superfamily protein
    Distance: 0; Region: exon8 (CDS)
Flanking Genome Sequence: ET7707 - 5-prime edge
```
CCATCCAAAT AACCCTGCAG CTCCTCCATA CTCGCATGGA ATCTGCAAAA 
CGCTCCTTAC TACATCTATG TGACCTCACA CCAAGATATA GCTTCAGCGA 
GTACCGATTG ATCCAGGCTG TTTGTAGTTC ACCGGAAAAT AACCAACGGT 
TCCTGCGCAC GTTCCACCGA TCACCCATAA ATCTTCATCT CACTCGAC
```

AT2G47790.1

Model type: Protein coding
Short Description: Transducin/WD40 repeat-like superfamily protein
Computational Description: Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G43770.1); Has 11741 Blast hits to 7668 proteins in 457 species: Archae - 10; Bacteria - 2663; Metazoa - 3454; Fungi - 3073; Plants - 916; Viruses - 0; Other Eukaryotes - 1625 (source: NCBI BLink).
Link: InterPro Scan - TAIR