ET8016

CSHL Arabidopsis genetrap mutant lines

Original: ET8016

Phenotypes

Morphological phenotypes

Original description

  • sterile
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: ET8016

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 96076 [Map]; Strand: w
      • AT2G01140.1 - [+] show detail - Aldolase superfamily protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: ET8016 - 3-prime edge 
    CGAGGACAAC CGTCAGGCCT ACAGGCAACT TCTGCTTACC ACTCCTGGCC 
    TCGGCGATTA CATCTCTGGT TCCATTCA

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 96290 [Map]; Strand: w
      • AT2G01140.1 - [+] show detail - Aldolase superfamily protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: ET8016 - 5-prime edge 
    CTTTTCTATT ACGCAATAAT CAAAGAATCT CACTCTACGT TTGACTTTGA 
    GAATTACGGA AACGAATCCA AACTAATAAA GCATCAAAGA GAGAGAGAGG 
    ATAAGGAGGA TACTCACGGC GGTTTTAACA AGCTCGTCGG AGTAAGCACC 
    GGCGCGGATC GCGAAGGAGA CTCGAGGAGG AGGAGAAGAA GAAGCAGAGG 
    TGTGAGCAAA GGAGCGTTGG CCGATCCATG GAGAAGAGAG GGTGTTAGGC 
    TTAACGAAGC TAGCAGACGC CATAGGTAGT ACAAGGAAGG TACAAAAGTG 
    ATGGTGATCA ATCTCTCGGG GAC

AT2G01140.1

Model type
Protein coding
Short Description
Aldolase superfamily protein
Computational Description
Aldolase superfamily protein; FUNCTIONS IN: fructose-bisphosphate aldolase activity; INVOLVED IN: response to oxidative stress, response to cadmium ion, pentose-phosphate shunt; LOCATED IN: mitochondrion, chloroplast, plastoglobule; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: fructose-bisphosphate aldolase 2 (TAIR:AT4G38970.1); Has 4797 Blast hits to 4792 proteins in 909 species: Archae - 0; Bacteria - 723; Metazoa - 1159; Fungi - 8; Plants - 476; Viruses - 0; Other Eukaryotes - 2431 (source: NCBI BLink).
Link
InterPro Scan - TAIR