ET8032

CSHL Arabidopsis genetrap mutant lines

Original: ET8032

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: ET8032

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 25166819 [Map]; Strand: w
      • AT5G62680.1 - [+] show detail - Major facilitator superfamily protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: ET8032 - 3-prime edge 
    TTTACCGACC GTTACCGACC GTTTTCATCC CTAGCGGGCG GTATTAGACC 
    GTGTAACTTA GCTTTTGGGG CCGATCAGTT TAACCCGAAA AGCGAATCAT 
    GGGAAAAGAG GGATTGACAG TTTCTTTAAT TGGTATTTCT TTACCTTCAC 
    TTTCGCGCAG ATCCTGTCGC TGACTCTAGT CGTCTACGTT CAGTCTAATG 
    TCAGTTGGAC GATCGGTCTA ACCATCCCTG CCGTTCTAAT GTTTTTGGCC 
    TGCTTGATT

AT5G62680.1

Model type
Protein coding
Short Description
Major facilitator superfamily protein
Computational Description
Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport, response to karrikin; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G47960.1); Has 3769 Blast hits to 3614 proteins in 562 species: Archae - 0; Bacteria - 609; Metazoa - 518; Fungi - 366; Plants - 2162; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink).
Link
InterPro Scan - TAIR