ET8126

CSHL Arabidopsis genetrap mutant lines

Original: ET8126

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: ET8126

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 14707594 [Map]; Strand: c
      • AT5G37160.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: ET8126 - 5-prime edge 
    ATGCTTTCTT GAACATTTGC AGCATCAGTG ATTCTCCCAC CATAAAACTC 
    CTTATTAGGG AAACGACTAA TGGAAGGATG CATTCGATAC TGAACATTAA 
    GCAAATGTTT GCTGTGGGGG ATCAAAACCA ATCTCTCAAA CAAGCTTCTT 
    CCGAATTTCG CCTTATCGCA TTCCTCCCTC TGAACCATTG CTGGCAACTG 
    ATACTCATCT CCTATTANAA GAGCATGACA AAGTCCAGGA AGTTGCAATG 
    CAGCAACTGA TTCACATTCC TTAAGCTGAG CTGCCTCATC TACCACAAGA 
    AGGTCCACAG AGCCTATCCT CGCCGGATTG ATATTAGCAA CACTTGAGGC 
    TGTGCAGAAT ATTATGTCAG CATTTTGTAG ACAAAACTTT CTAATATCTT 
    CATTATTTGC TAAACCAAAA ATCCCAAAAC ATTTTGGAAG TNGACAGAGA 
    GCCTGAAGGG CATCAACACT GATGAGTTTG TTGAAGCAAT TGAATCTAAA 
    ACCACC

AT5G37160.1

Model type
Protein coding
Short Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, DNA binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.12 twelve leaves visible, D bilateral stage; CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G37150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR