ET8135

CSHL Arabidopsis genetrap mutant lines

Original: ET8135

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: ET8135

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 9272323 [Map]; Strand: w
      • AT2G21710.1 - [+] show detail - Mitochondrial transcription termination factor family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: ET8135 - 3-prime edge 
    TATTTTACCG ACCGTTACCG ACCGTTTTAT CCCTATAAAG AATGGTTTCA 
    CGACAAGGAT TCTTTTCATT CCTTCTTTGG GGATTCCAAG GTAGTAGAAA 
    TATTTGACTA GAGGCTTCCA TCTTTCTTCA ATACTGCATC CCATTAGGTG 
    TGGCTTGTAG GCTAATAGTC TCCCAACTTC TTCTGTGCTA ACGACAAACT 
    CTTTCAGGTA ATTGATCTGG TTTAATACAA GCAACACAAT TATGAACTTA 
    AACGACAATC TTAACGCTGG AGTATTAAAA AGAGCTTTCA GTACCTTTTT 
    CTCCATCACT TGGAATGAGA AGAAGCCAAT TATCTTTGGA TAATCATAGA 
    CCATAGTGCC AAAGTCATTC TGATTCATAC CCATTTTCAA GAAGAAATCA 
    ACACGGCTTT TCACTTCTTC CATGCTGAAA GACAGCAACT CAGGACATCT 
    TCCAACCACA TAACCCATCC AATCCCTCCT CACACCATTG CTCTCTAGAT 
    ACTCAACAAT TTCGTTTAGT TCCTCACGGT TACGTTGCAA TATATTATCC 
    CCAGATCTCA AGAACGCAAC TGCAATGAAT TCACCCTTCA CATGAATGCT 
    C

AT2G21710.1

Model type
Protein coding
Short Description
Mitochondrial transcription termination factor family protein
Computational Description
embryo defective 2219 (EMB2219); INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT4G02990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR